Gene Information

Name : CPF_1032 (CPF_1032)
Accession : YP_695478.1
Strain : Clostridium perfringens ATCC 13124
Genome accession: NC_008261
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1183107 - 1183316 bp
Length : 210 bp
Strand : +
Note : identified by match to protein family HMM PF01381

DNA sequence :
ATGAATAAAATAAAGGAATATAGATCTCTAGCTAATATGTCACAGTTAGAGCTTTCAAAAAAGGTTGGAGTTGCAAGACA
AACCATAAATTTAATTGAAAATCAAAAATATAATCCATCCCTAGATTTATGTATTAGGATTGCCAAGGCCTTAGGAACTG
ATTTAAACACATTATTTTGGGTTAATGAGGAGGAACGAGAGGATGAATAA

Protein sequence :
MNKIKEYRSLANMSQLELSKKVGVARQTINLIENQKYNPSLDLCIRIAKALGTDLNTLFWVNEEEREDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-08 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-05 47
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-05 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CPF_1032 YP_695478.1 DNA-binding protein VFG2168 Protein 1e-05 47
CPF_1032 YP_695478.1 DNA-binding protein VFG2175 Protein 1e-05 47