|
Name : ugd1 (ABO_0932) Accession : YP_692652.1 Strain : Alcanivorax borkumensis SK2 Genome accession: NC_008260 Putative virulence/resistance : Virulence Product : UDP-glucose 6-dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : 1.1.1.22 Position : 1044440 - 1045606 bp Length : 1167 bp Strand : + Note : (GDP-mannose 6-dehydrogenase) identified by sequence similarity; InterPro: UDP-glucose/GDP-mannose dehydrogenase family; High confidence in function and specificity DNA sequence : ATGAAAATTGCAGTGGCGGGAATGGGGTATGTCGGGTTATCCAATGCGGTGTTGCTGGCCCAGAATAACACCGTAGTGGC GCTAGATATTGATGCCATAAAGGTAGAGAAAGTTCAAAACGGAATTTCCCCGATTGAGGATGCTGAAATTCAGTGCTTTC TGACAGCGCAATCGCTGGATTTGCACGCGACAACCGATAAAAATATGGCATTTGAAGGTGCCGATTTTGTAGTAGTGGCG ACTCCCACTGACTATGACGTAAAGGCAAATTATTTCAATACGAGTAGTGTCGAGCTGGTAATTAGTGATGTGCTGGCTAT TAATCCCCGCGCTACCATAATAATTAAATCGACGGTGCCGGTGGGTTATACGAAGACGCTGAGGGAACGTTTTGGTGTTG AAAATATCATCTTTTCTCCGGAGTTTTTGCGGGAAGGCAAAGCCCTGCATGATAATTTGCACCCCTCTCGAATCATTGTA GGGGCCCAGTGTGAAGCCGCTCGTATTTTTGCTGACTTGCTTGTTCAGGGGGCGGAAACCGTTGCTCCTCCTGTGATATT GACAGATTCAACCGAGGCAGAAGCGATTAAACTTTTTTCCAATACTTATTTGGCTATGCGGGTGGCCTATTTCAATGAGC TGGATAGCTATGCCGCTACCCATAACTTGAATACCCGTCAGATCATTGATGGGGTTTGCCTTGATCCGCGGATTGGGGGG CATTACAACAATCCTTCTTTTGGTTATGGGGGGTATTGTTTGCCCAAAGATACCAAGCAGTTAGTGGCTAACTACGAGGA TGTGCCGAATAACTTGATTAAGGCCATTGTGGATGCCAACCGGACACGTAAAGATTTTATAGCCGAAGATATTTTACGCC GTAACCCCGCCCGTGTGGGTATCTACCGGTTGGTGATGAAAGCGGGGTCGGACAACTTTAGGGCCTCTTCCATCCAAGGT GTTATGAAGCGGCTGAAGGCGAAAGGTATTGAAGTCGTGGTTTACGAGCCGGCACTGGCGGAGGAGGCATTTTTCAATTC GGTGGTGATTCGCGATTTTGAAACGTTTATTCAAACCTGTGATGTGATTGTTTCTAATCGTATGGTGAGTGAACTGGAAG GGGTGGCTGACAAGGTTTACACCCGTGATCTTTTTGGAAATGATTAA Protein sequence : MKIAVAGMGYVGLSNAVLLAQNNTVVALDIDAIKVEKVQNGISPIEDAEIQCFLTAQSLDLHATTDKNMAFEGADFVVVA TPTDYDVKANYFNTSSVELVISDVLAINPRATIIIKSTVPVGYTKTLRERFGVENIIFSPEFLREGKALHDNLHPSRIIV GAQCEAARIFADLLVQGAETVAPPVILTDSTEAEAIKLFSNTYLAMRVAYFNELDSYAATHNLNTRQIIDGVCLDPRIGG HYNNPSFGYGGYCLPKDTKQLVANYEDVPNNLIKAIVDANRTRKDFIAEDILRRNPARVGIYRLVMKAGSDNFRASSIQG VMKRLKAKGIEVVVYEPALAEEAFFNSVVIRDFETFIQTCDVIVSNRMVSELEGVADKVYTRDLFGND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0068 | YP_300158.1 | UDP-glucose 6-dehydrogenase | Not tested | SCC15305cap | Protein | 4e-89 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ugd1 | YP_692652.1 | UDP-glucose 6-dehydrogenase | VFG0963 | Protein | 3e-98 | 52 |
