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Name : wbpM (ABO_0928) Accession : YP_692648.1 Strain : Alcanivorax borkumensis SK2 Genome accession: NC_008260 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1037654 - 1039543 bp Length : 1890 bp Strand : + Note : identified by sequence similarity; InterPro: Polysaccharide biosynthesis protein CapD type; Family membership DNA sequence : ATGGTAATGCTGGGTGCTGATGCAGTCGCCGCCCCCCTATTACTCTGGCTTGCCTATGGCTTGCGCCTCAATACCGCCGC CCCGGAAGTGGCCGACCTATGGTTGCTGATGGCTACGCCGTTGGTGGTGCTGCCGGTGCTATATGCGTTCGGTTTTTACC GTTCGGTTGTGCGTTACCTAGGGGCTGAAGTGGCGTGGTCTATCCTGTTTGGGGCGACTCTTTCGGTGGTGCTGCTGGCG GCGACGACTTATATGGTATCGGGCTCTACCCCGCGTTCAGTGTTTATTATTTTCTGGGCGTTGCTAGTGCTATACCTAGG GGGCAGCCGCTTTATGATGCGCCGTTTCCTTTATAACGTGCTAGGTAAGCATACTTTGCGTGAAGCGGTGGCGGTATTCG GTGCTGGTGGAGCGGGGGCTCAGCTGGTGTCTGGGTTATTGTCTTCCACCGAGTTGCGCCCGCTGATGATAGTGGACGAT GCGCCCGGTAAACAGGGGATGTTGCTTTGCGGTGTGCCGGTGGTGGGGCGGCGCGCTTTGGAAAAAGCGGTAGAACGGGG GGCTATTCGTACGGTGTTACTGGCTCTGCCGTCTGAGAGCCGGGCGACACGGATGGCAGTGGTGCGCTGGCTGGAAACCC TGAATGTGCATGTGCAGACGGTGCCTTCGTTTGCGGATATTGCTAGCGGCAAGGCGCGGCTTGAAGAAGTCAAAGACGTG TCTATCGAAGACTTGCTGGGCCGTGACCCGGTGCCCCCCCGCGCGGATTTACTGTCGCGCTGTATTAGTGGTAAGCATGT TCTGGTGACGGGCGCGGCGGGCTCCATTGGTAGCGAGCTTTGTCGCCAGATTCTTAAGTTGAACCCTTCCCGCTTGGTGT TGCTCGATCAAAGTGAATTTGGCCTATATGCCATTGAGAAAGAATTGCGAGCAACGGCGGACAGCCTTGGTAAAAGCGTC GAAATTGAGGCGGTGCTCGGTTCAGTGGTGAACCGGGGCTTGATGGAGCGGCTTTGCAGTGACCAACGGGTGGATACGGT GTACCACGCCGCAGCGTACAAGCATGTGCCGATTGTGGAGGCTAACCCTACGGCTGGAGTGCGCAATAATATCTTGGGGA CGCTGGAGGCCGCACTGGGAGCAGAAGCTGCTCATGTGAAGCACTTTATTCTTGTGTCCACGGATAAGGCTGTTCGCCCA ACTAACGTGATGGGGGCCACTAAGCGTTTTGCAGAACTGGTGCTCCAGGCCATAGCCGCTAGGGGTTCGGACACCGTGTT CTCGATGGTACGTTTTGGCAACGTGCTTGGCTCGTCTGGTTCGGTGGTGCCCTTGTTCCGTGACCAGATTCGTAAAGGCG GCCCGGTAACGGTGACCCACCCGGATGTGATTCGCTATTTTATGACCATCCCTGAAGCGTCCCAGTTAGTGATTCAGGCG GGTGCCATGGCCCAGGGCGGCGAAGTATTCGTGTTGGATATGGGTGAGCCGGTGCGAATTGTTGACTTGGCCCGCACCAT GGTGCATTTGATGGGGATGACGGTGCGCGATGAGAAAATGCCGGAGGGTGACATTGAGATTGCCTTTTCCGGCCTGCGGC CCGGTGAGAAGCTCTATGAAGAGTTATTGATTGGTGAGTGCAGCATCCGCACTGAGCATGAAATGATTATGCAGGCCCAT GAGGAAAAGCTGAGCTGGGACGAGGTGCATTTTGCCCTGGAGGCGTTCCGTAAGGCGTTAAGCCGTGCCGACCAGGATGC TCTGCGGGCTTTACTGCGTAGTTATGTCAATGGGTATCAGCCAGAGGGGGTGGGTGCTGAGTCACCCGAGAGCCTTGCGG TACGTGAATTGCCGGCCTTTACCGGTAAAGCCGTTAGCGTTACGGAGTAG Protein sequence : MVMLGADAVAAPLLLWLAYGLRLNTAAPEVADLWLLMATPLVVLPVLYAFGFYRSVVRYLGAEVAWSILFGATLSVVLLA ATTYMVSGSTPRSVFIIFWALLVLYLGGSRFMMRRFLYNVLGKHTLREAVAVFGAGGAGAQLVSGLLSSTELRPLMIVDD APGKQGMLLCGVPVVGRRALEKAVERGAIRTVLLALPSESRATRMAVVRWLETLNVHVQTVPSFADIASGKARLEEVKDV SIEDLLGRDPVPPRADLLSRCISGKHVLVTGAAGSIGSELCRQILKLNPSRLVLLDQSEFGLYAIEKELRATADSLGKSV EIEAVLGSVVNRGLMERLCSDQRVDTVYHAAAYKHVPIVEANPTAGVRNNILGTLEAALGAEAAHVKHFILVSTDKAVRP TNVMGATKRFAELVLQAIAARGSDTVFSMVRFGNVLGSSGSVVPLFRDQIRKGGPVTVTHPDVIRYFMTIPEASQLVIQA GAMAQGGEVFVLDMGEPVRIVDLARTMVHLMGMTVRDEKMPEGDIEIAFSGLRPGEKLYEELLIGECSIRTEHEMIMQAH EEKLSWDEVHFALEAFRKALSRADQDALRALLRSYVNGYQPEGVGAESPESLAVRELPAFTGKAVSVTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-78 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-74 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wbpM | YP_692648.1 | polysaccharide biosynthesis protein | VFG0029 | Protein | 4e-104 | 47 |
| wbpM | YP_692648.1 | polysaccharide biosynthesis protein | VFG1300 | Protein | 1e-78 | 43 |
