Gene Information

Name : ABO_0925 (ABO_0925)
Accession : YP_692645.1
Strain : Alcanivorax borkumensis SK2
Genome accession: NC_008260
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 1034539 - 1035135 bp
Length : 597 bp
Strand : +
Note : identified by match to PFAM protein family HMMPF02397 This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.; Family membership

DNA sequence :
GTGATGAAACGGTTGATGGATATCGCGGGCGCCCTGTGTGGGCTGCTGGTGCTTGGCCCGGTGATTTTGCTATTGGCTGT
GCTGGTCAGGGTAAAACTGGGTAGCCCGGTGTTGTTTCGGCAGGTGCGGCCAGGAATGGATGGCCGTGCGTTTCAAATGG
CCAAGTTCCGCACCATGACGGATGCCCGTGGTACAAACGGTGAATTGCTGCCGGATGCGGACCGGCTTACCGGCTTTGGC
CAGTTTCTTCGCTCCAGTAGCCTCGATGAGCTGCCTGAGCTCTGGAACGTGCTGAAGGGCGATATGAGCCTGGTGGGGCC
GCGCCCTTTGTTGATGGAATATCTTCCTCTCTATTCTGATCGCCAGGCGCGCCGCCATGAAGTCCGCCCCGGAATTACCG
GTTGGGCGCAGGTGAATGGCCGTAACGCCCTGAGTTGGGATGAAAAATTCGAGCTGGACGTTTGGTATGTGGAAAACCGG
ACTCTGTGGCTGGATATAAAAATCCTGTTTCTGACGGTCTGGAAGGTGATCAAGCGGGACGACATCAATCAGGATGGTGA
GGCGACCATGACGCGTTTTACCGGGAGCCAGAAATGA

Protein sequence :
MMKRLMDIAGALCGLLVLGPVILLLAVLVRVKLGSPVLFRQVRPGMDGRAFQMAKFRTMTDARGTNGELLPDADRLTGFG
QFLRSSSLDELPELWNVLKGDMSLVGPRPLLMEYLPLYSDRQARRHEVRPGITGWAQVNGRNALSWDEKFELDVWYVENR
TLWLDIKILFLTVWKVIKRDDINQDGEATMTRFTGSQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 9e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABO_0925 YP_692645.1 sugar transferase VFG1369 Protein 3e-21 41