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Name : galE (ABO_0909) Accession : YP_692629.1 Strain : Alcanivorax borkumensis SK2 Genome accession: NC_008260 Putative virulence/resistance : Virulence Product : 4-epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : 5.1.3.2 Position : 1016975 - 1018015 bp Length : 1041 bp Strand : + Note : identified by match to TIGR protein family HMMTIGR01746; InterPro: Nucleoside-diphosphate dependent epimerase/dehydratase family; Specificity unclear DNA sequence : ATGACAACCCGCTACGAACAGGTACAGCAAGACCTTAAAGCCAATCCCAAAACCTGGCTCGTCACCGGCGTGGCCGGTTT TATCGGCTCGAATTTACTCGAAACATTGTTGGGCTTGAACCAAACTGTCATCGGCCTGGACAACTTTGCCACTGGCCACC AGCACAACCTGGATGAAGTCCAGCAAACCGTCACTGCTGACCAATGGGCCAACTTCACCTTCATTGAAGGCGACATCCGC AGTCTGGATGACTGCAAAAAAGCGGTCACGGGTGTGGACTACGTACTCCATCAGGCTGCCCTGGGCTCCGTCCCGCGTTC TATCGAAGACCCAATCACTACTAACCAAGCGAATATCGACGGCTTTCTGAATATGCTAGTGGCCGCCAAAGACGAAAACG TGGCCAGCTTCACCTACGCGGCCTCCAGTTCTACCTACGGCGACCACCCGGGCCTACCCAAAGTGGAAGACAAAATCGGC AAGCCCCTTTCCCCTTATGCCGTCACGAAATACGTCAACGAACTCTATGCTGACGTATTTGCCCGCACCTACGATTTCAA CACCATCGGCTTGCGCTATTTTAACGTGTTCGGCAAACGCCAGGACCCTAACGGTGCCTACGCCGCGGTCATCCCCAAAT GGACCGCCGCCATGATCCAGGGCGAGGACGTGTTCATCAATGGCGACGGCGAAACCAGCCGGGATTTCTGCTTTATCGAG AATGTGGTGCAGATAAATCTGTTGGCCGCCACCGCAGAGGCAGAAGCAAAAAACCAGGTCTTCAACGTGGCCTTGGGCGA CAGAACCACGCTGAACACCCTGTTCGATGCGCTTAAAACAGCCCTGAAAGAGTGTGGGGTGAACTATGAAAGTGATCCTG TTTACCGTGATTTCCGCGCAGGAGACGTTCGCCACTCCCAGGCCGACATCAGCAAGGCACAAGAGTTGCTGGGCTATGAA CCCGCCTACCGCATTTACGATGGCATCGGTAAGGCCATGCCCTGGTACGAAAGCACACTGAATACTGGAAGCGACGCATG A Protein sequence : MTTRYEQVQQDLKANPKTWLVTGVAGFIGSNLLETLLGLNQTVIGLDNFATGHQHNLDEVQQTVTADQWANFTFIEGDIR SLDDCKKAVTGVDYVLHQAALGSVPRSIEDPITTNQANIDGFLNMLVAAKDENVASFTYAASSSTYGDHPGLPKVEDKIG KPLSPYAVTKYVNELYADVFARTYDFNTIGLRYFNVFGKRQDPNGAYAAVIPKWTAAMIQGEDVFINGDGETSRDFCFIE NVVQINLLAATAEAEAKNQVFNVALGDRTTLNTLFDALKTALKECGVNYESDPVYRDFRAGDVRHSQADISKAQELLGYE PAYRIYDGIGKAMPWYESTLNTGSDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviC | NP_458739.1 | Vi polysaccharide biosynthesis protein, epimerase | Virulence | SPI-7 | Protein | 7e-104 | 65 |
| tviC | NP_807944.1 | VI polysaccharide biosynthesis epimerase | Virulence | SPI-7 | Protein | 7e-104 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| galE | YP_692629.1 | 4-epimerase | VFG0430 | Protein | 3e-104 | 65 |
