Gene Information

Name : pilD (ABO_0612)
Accession : YP_692332.1
Strain : Alcanivorax borkumensis SK2
Genome accession: NC_008260
Putative virulence/resistance : Virulence
Product : leaderpeptidase and N-methyltransferase
Function : -
COG functional category : N : Cell motility
COG ID : COG1989
EC number : 3.4.23.43
Position : 671910 - 672785 bp
Length : 876 bp
Strand : -
Note : identified by sequence similarity InterPro: Prepilin cysteine protease (C20) type IV; High confidence in function and specificity

DNA sequence : 
ATGATTTCAGATTCCCTGATGCTTCTCTCTTCCAGTCCGACCCTTCTGATCGGGCTTTGTGTTGTTATGGGGCTGCTGGT
AGGCAGTTTTTTAAATGTAGTCATCCACCGTTTACCGTTAATGATGGAACGAAGCTGGAAGCAAGAAGCCCGTGAAGTGC
TTGAGCTACCAGCGGAAGAAACCGATGGTATTTTCAACCTAGCAACGCCGCGCTCGCGCTGCCCGAAATGCGGCCATGCG
ATCCGCTGGTATGAGAATATCCCAGTGCTTAGCTGGCTTGCCCTGCGCGGTAAGTGCAGGGGCTGCAAAACACCGATCAG
TAAGCGCTACCCCATTATCGAAATTGTCAGCGGGATCCTGGCGGGACTTTGCGCCTGGCACTTTGGTTATGGCCCCTGGT
TGGCATTCACGCTTTTTGCTACCTGGGTGTTGTTAGCTGCTGCCATGATTGATGCGGATACTACATTACTGCCAGACACC
CTAAATTACTGGCTATTGTGGGCAGGCTTGCTGGCTGCAGTGACGGGGGTGTCTCCGGTTTCACTAAATGATGCTGTCAT
TGGCGCGATGATGGGCTATTTATCCTTGTGGAGCATCTATTGGCTATTCAAGCTAATCACCGGCAAAGAAGGTATGGGCT
ACGGCGATTTCAAGCTGTTGGCTGCACTGGGTGCTTGGGTTGGCTGGCAATACCTACCCGTGATCATTCTATTATCGTCT
ATCGTGGGGCTAGTCTTTGCTATCGCCATGATGATATTTAGCGGTGAAAGGCGCGCGCAAATCCCCTTTGGCCCCTATCT
CGCCACAGCCGGGTGGATTGCCTTGCTCTGGGGCGATAGTATCGTCAGCTCGTATCTGGGTATGTTTAAACTCTAA

Protein sequence : 
MISDSLMLLSSSPTLLIGLCVVMGLLVGSFLNVVIHRLPLMMERSWKQEAREVLELPAEETDGIFNLATPRSRCPKCGHA
IRWYENIPVLSWLALRGKCRGCKTPISKRYPIIEIVSGILAGLCAWHFGYGPWLAFTLFATWVLLAAAMIDADTTLLPDT
LNYWLLWAGLLAAVTGVSPVSLNDAVIGAMMGYLSLWSIYWLFKLITGKEGMGYGDFKLLAALGAWVGWQYLPVIILLSS
IVGLVFAIAMMIFSGERRAQIPFGPYLATAGWIALLWGDSIVSSYLGMFKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85237.1 putative prepilin peptidase A Not tested PAI V 536 Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilD YP_692332.1 leaderpeptidase and N-methyltransferase VFG0114 Protein 7e-66 61
pilD YP_692332.1 leaderpeptidase and N-methyltransferase VFG0234 Protein 5e-48 51
pilD YP_692332.1 leaderpeptidase and N-methyltransferase VFG2428 Protein 6e-43 49
pilD YP_692332.1 leaderpeptidase and N-methyltransferase VFG1882 Protein 5e-52 47