|
Name : murD (ABO_0596) Accession : YP_692316.1 Strain : Alcanivorax borkumensis SK2 Genome accession: NC_008260 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoylalanine--D-glutamate ligase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0771 EC number : 6.3.2.9 Position : 653512 - 654837 bp Length : 1326 bp Strand : + Note : identified by match to PFAM protein family HMMPF01225 InterPro: Cytoplasmic peptidoglycan synthetases N-terminal; High confidence in function and specificity DNA sequence : ATGGCGAAAGACGGGTTTGATCTGGTCATTGGCCTGGGTGTAACAGGCCGCTCCGTGATCCGCTATCTAACGGATCAGGG TATGCCCGTGCGCGCCATAGATACCCGTGCTGAACCGGTCGGCCTAGACGCCCTGTGCGCAGACTTTCCGGACCTAAAAG TGCATACCGGTGGCTTCAAGAAAGGCTGGATGGGCAAGGCCCGTCGTCTGATCGTGAGCCCGGGTGTGGCGGTGTCCACG CCCGCCATTGCCGAGCAGGTAGTGGATGGCAAAGAAGTGATCGGCGACATTGAGCTGTTCGCCCGTGCGGCCAGTGAGCC GCTGGTGGCCATCACCGGTTCCAATGCCAAAAGCACAGTGACAACGCTGCTGGGGCAAGTGGCAGATGCCTGTGGGATGA ACCCAGGTATCGGCGGCAACCTGGGTGTGCCAGCGCTGGAATTGCTGGACGACCAAGCGCGGTTGTACGTTCTTGAGTTG TCCAGCTTTCAGTTGGAAACCACTTACAGCTTGAGTGCGGAAGTGGCCACAGTGTTAAACGTGTCCCAGGATCATTTGGA CCGTTACGCCAGCTTTGCAGATTACCTAGCGGCTAAGCAGCGCGTCTATGACGGCTGCCAGGTGGCGGTCTGGAATCGTG ATGATTTGGCAACCCGTCCGCCGGCTACGGTGGCCCGGCAGATCAGTTTTGGCGCCCACCCGGAAGCGGATTACCGGCTA GATAGCGAAAACGGTCAACTACTGTGCCGAGGCGAGCCCTTATTGTCGCTGTCAGAGCTGGCGCTCACCGGCCACCATAA TGCCATGAATATTCTCTCGGTTCTGGCGATCAGTGATGCGCTGTCTTTGAATCGGGATAAAGCACTGGCCACAGTGAAAA CCTTTACTGGGCTGCCGCATCGTTGCCAGCTGGTCGCCGAATCAGGTGGTGTGCGCTGGTTTAACGATTCGAAGGCCACC AATGTGGGCGCCACCTTGGCGGCGCTGACCGGGATCGGTGAAAGCATCGAGGGCAAAGTGATTCTGGTCGCTGGTGGCCT AGGCAAAGGGCAGGATTTCTCTCCGCTGGCCGAGCCTGCCCGGCAGTATTTACGTGCCGCCCTATTGATGGGTGAAGACC GTACTACCGTGGCACAGGGCATGTCTGCGGCGCCCTGTGAACTGGTGGCAGATATGGCTGTTGCGGTACGTCGCGCCCAT GCCCTGGCACAGCCGGGCGATGCCGTTTTACTGTCACCGGCCTGTGCCTCGTTTGATCAGTACAGCGGTTTTGCTGCCCG CGGCGATGATTTCACCACCCGTGCCCAGGAGTTGTGCCATGACTGA Protein sequence : MAKDGFDLVIGLGVTGRSVIRYLTDQGMPVRAIDTRAEPVGLDALCADFPDLKVHTGGFKKGWMGKARRLIVSPGVAVST PAIAEQVVDGKEVIGDIELFARAASEPLVAITGSNAKSTVTTLLGQVADACGMNPGIGGNLGVPALELLDDQARLYVLEL SSFQLETTYSLSAEVATVLNVSQDHLDRYASFADYLAAKQRVYDGCQVAVWNRDDLATRPPATVARQISFGAHPEADYRL DSENGQLLCRGEPLLSLSELALTGHHNAMNILSVLAISDALSLNRDKALATVKTFTGLPHRCQLVAESGGVRWFNDSKAT NVGATLAALTGIGESIEGKVILVAGGLGKGQDFSPLAEPARQYLRAALLMGEDRTTVAQGMSAAPCELVADMAVAVRRAH ALAQPGDAVLLSPACASFDQYSGFAARGDDFTTRAQELCHD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 1e-76 | 46 |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 1e-76 | 46 |
