|
Name : kpsF (ABO_0557) Accession : YP_692277.1 Strain : Alcanivorax borkumensis SK2 Genome accession: NC_008260 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 614811 - 615779 bp Length : 969 bp Strand : - Note : KpsF/GutQ family protein identified by match to PFAM protein family HMMPF01380 InterPro: KpsF/GutQ family protein; Family membership DNA sequence : ATGAGCCACAACCACATCAGCGTTGGCCAACGGGTACTAGAAATCGAAGCCCGGGCCGTGGATGCTCTGAAAGACAGCCT GGACACCAGCTTTTGCGCCGCCTGCGACCTGATGCTGAACGCCAAAGGCCGCGTCATCGTCACCGGCATGGGCAAAAGCG GGCACGTAGGCAGCAAGCTAGCCGCCACCCTTGCCAGCACCGGCACCCCCTCTTTTTTTGTTCACCCTGGCGAAGCCTCC CATGGTGATTTGGGCATGATTACCGCTGACGACGTGGTACTGGCACTGTCCAACTCCGGCGAAACCGCCGAAGTGCTGGC CATATTACCGGTCATCAAACGTAAGGGCACCGCCTTGGTCGGCATGACCGGGCGCCCACAATCTGCATTAGCGCAACTGT CAGATGTACATCTGACCGTGGCCGTAGCGGAAGAGGCCTGCCCCCATAATCTGGCACCGACTTCTTCGACCACCGCCGCG CTGGCCATGGGCGATGCCTTGGCTATTGCCCTGTTAGAAGCCCGCGGCTTCACACCGGAAGACTTTGCCCTCAGCCATCC CGGAGGCAGCCTAGGCCGGCGCCTGCTATTGAAAGTGGATGACATCATGCACACTGGTGAGCAGCTTCCCGTGGTCAGCA CTACCACCTCGCTTAGCGAAGCCCTACTGGAAATGACCCATAAAGGCCTGGGGATGACCGCCATCACCCACACAGACGGC ACTCTAGCCGGCATTTTTACTGATGGTGACTTGCGCCGCATCCTCGACCGGGACATCGATATTCGAAAAGCCACCATTGC CGAGGTTATGGTTTCTGATCCAATCACCATTGCCCAAGGTCATCTAGCCGCTGAAGCTTTACAAATCATGGAAAACCGCA AGATTAACGGCTTAATGGTTTGTGACAGTGATGGCAAACCGCTCGGCGCTTTCAACATGCAAGACCTACTGCGCGCGGGA GTAGTGTAA Protein sequence : MSHNHISVGQRVLEIEARAVDALKDSLDTSFCAACDLMLNAKGRVIVTGMGKSGHVGSKLAATLASTGTPSFFVHPGEAS HGDLGMITADDVVLALSNSGETAEVLAILPVIKRKGTALVGMTGRPQSALAQLSDVHLTVAVAEEACPHNLAPTSSTTAA LAMGDALAIALLEARGFTPEDFALSHPGGSLGRRLLLKVDDIMHTGEQLPVVSTTTSLSEALLEMTHKGLGMTAITHTDG TLAGIFTDGDLRRILDRDIDIRKATIAEVMVSDPITIAQGHLAAEALQIMENRKINGLMVCDSDGKPLGAFNMQDLLRAG VV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-44 | 45 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 8e-45 | 45 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-44 | 45 |
