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Name : gabD (ABO_0511) Accession : YP_692231.1 Strain : Alcanivorax borkumensis SK2 Genome accession: NC_008260 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 562019 - 563476 bp Length : 1458 bp Strand : - Note : (succinate-semialdehyde dehydrogenase) identified by sequencesimilarity; InterPro: Aldehyde dehydrogenase family; High confidence in function and specificity DNA sequence : ATGACAATGGTTTCTCTCACTGATAACGGCCTATTTCGCCAGCAATGCTACATCAATGGTCAATGGTGTGATGCGGATGA CGGCGCCACCTTTGCGGTCGACAACCCGGCAAGTGGGGAAGACATCGGCACCTCGCCTCGTATGGGCGAGACGGAGACTC GCCGCGCCATTGACGCCGCCCACCAAGCCTTTCCTGGCTGGCGCGATAAGACCGCCGCTGAACGTGCCAATCTGCTCATG GCCTGGCACGACCTGATGATAGAGCACCAGGACGATCTGGGTCGGCTGATGACCTTGGAACAAGGCAAACCGCTGCCCGA AGCTAAAGGCGAAATAGCCTACTCAGCCTCTTTCCTGAAATGGTTTGCTGAAGAAGCCCGCCGAGCCTATGGCGATACTA TTCCAGCGTCCAAACCCGGGCAGCAGATTGTAGTCATCAAACAACCCATTGGGGTCACCGCTGCAATCACCCCCTGGAAT TTCCCTTCTTCCATGATTACCCGCAAAGCCGGCGCCGCACTAGCTGCGGGCTGCACCATGGTGGTCAAACCGGCCAGCGC CACCCCTTATTCGGCTCTGGCACTGGCTGAACTTGCCGCCCGCGCGGGCATCCCCGCGGGTGTCTTCAACGTTATCACCG GCAGTGCCAGTGCCATTTCCACCGCCATCACCGATTCTCCCATTGTCCGCAAACTCAGCTTTACCGGCTCCACCGAGGTG GGCAGCCAGCTGATGGCTCAGTGCGCCAAACACATCCAGAAAGTCTCACTGGAGTTGGGCGGCAACGCTCCCTTCCTCGT ATTTGATGACGCCAACCTGGATAAAGCGGTTGAAGGCGCCATGGCCAGCAAGTTCCGCAACACTGGCCAGACCTGCGTCT GCGTGAACCGCTTTCTGGTCCAAGAAAGCATCCACGATGCCTTTGTGGAAAAATTTAAGGTGGCCATCGAAGCCATGAAA GTCGGCGACGGCTTTGATGAAGGCGTTTCTCAAGCCGCATTGATCAACCGCGGCGCCTCCGACAAGGTGATGGAGCACTT GGAAGATGCTCTGAGTAAAGGCGCCAAGGTGATCACCGGTGGACAGCGCCATGAACGCGGCGGCAACTACGTACAGCCCA CCCTGATTACCAATGTCTCCACCGATGCCCAGCTCTGCCAAGATGAAACGTTCGGGCCGCTGGCAGCCATCATTCCTTTT AAAACCGAAGAAGAAGCCCTGCACATTGCCAACGACACCCCCTATGGGCTGGCTGCGTACTTCTACAGTGACAATATCCA CCGCTGCTGGCGCGTCGCCGAAGCGCTGGAAAGCGGTATGGTCGGCGTTAACGAAGGCCTAATCTCCAACGCCACCGCGC CGTTTGGCGGAGTCAAGGAATCCGGACTCGGTCGCGAAGGCTCCCACCAGGGCATGGAAGAGTATCTGGAAACAAAATAT CTGTGCATGGGAAGCTAA Protein sequence : MTMVSLTDNGLFRQQCYINGQWCDADDGATFAVDNPASGEDIGTSPRMGETETRRAIDAAHQAFPGWRDKTAAERANLLM AWHDLMIEHQDDLGRLMTLEQGKPLPEAKGEIAYSASFLKWFAEEARRAYGDTIPASKPGQQIVVIKQPIGVTAAITPWN FPSSMITRKAGAALAAGCTMVVKPASATPYSALALAELAARAGIPAGVFNVITGSASAISTAITDSPIVRKLSFTGSTEV GSQLMAQCAKHIQKVSLELGGNAPFLVFDDANLDKAVEGAMASKFRNTGQTCVCVNRFLVQESIHDAFVEKFKVAIEAMK VGDGFDEGVSQAALINRGASDKVMEHLEDALSKGAKVITGGQRHERGGNYVQPTLITNVSTDAQLCQDETFGPLAAIIPF KTEEEALHIANDTPYGLAAYFYSDNIHRCWRVAEALESGMVGVNEGLISNATAPFGGVKESGLGREGSHQGMEEYLETKY LCMGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-139 | 60 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-84 | 41 |
