Gene Information

Name : ygiX (ABO_0031)
Accession : YP_691751.1
Strain : Alcanivorax borkumensis SK2
Genome accession: NC_008260
Putative virulence/resistance : Virulence
Product : transcriptional regulator QseB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 33315 - 33977 bp
Length : 663 bp
Strand : -
Note : probable 2-component transcription regulator identified by match to TIGR protein family HMMTIGR01387 InterPro: Response regulator receiver domain; High confidence in function and specificity

DNA sequence : 
ATGCATATTTTATTGATCGAAGATGATGCTCTGTTAGGCGACGGTATTCAGGCCGGTCTACAAGCCATGGGATTTACCGT
AGCCTGGGTGACGCTTGCGCGGGACGGCCTGGCCGCTTGGAAAAGCGTGGATTTTGATGCGTTGGTGCTAGATCTAGGAC
TGCCCGACCAAGAGGGTAGTGAAGCCCTTTGCCAATGGCGTGAGGCTGGGCTGACGGTGCCGGTATTGATCCTCACCGCC
CGAGACGCCGTGCAAGACCGCATTGATGGCTTGCAGCGCGGCGCCGATGATTACCTGATTAAGCCGTTTGATTTGGGCGA
GCTGGCAGCGCGCTTACAGGCCCTATTGCGTCGTACCCGGGGCCAAGCCCGTCCGTTTATTGAGCATGGCAGGCTACGGG
TCGATCCGTTCCGACAGCAAGTCTGGCTGGCGGATAAAGAAGTGGAATTGCAACGGCGGGAAATGGCGTTGTTGCTTGCT
TTGTTGCAAAGCCAGGGTCGGTTACTCACGGCGGACCAATTGGCCGACCGTGTTTACGGCTGGATGGACGGCGTGGAGAG
CAACGCTTTGACGGTACATATCCATAACCTGCGCCGCAAACTGGATAGTCGCATTGTGGAAACCGTACGCGGTGGCGGTT
ACCGGTTAGGCGCGCCGCTATGA

Protein sequence : 
MHILLIEDDALLGDGIQAGLQAMGFTVAWVTLARDGLAAWKSVDFDALVLDLGLPDQEGSEALCQWREAGLTVPVLILTA
RDAVQDRIDGLQRGADDYLIKPFDLGELAARLQALLRRTRGQARPFIEHGRLRVDPFRQQVWLADKEVELQRREMALLLA
LLQSQGRLLTADQLADRVYGWMDGVESNALTVHIHNLRRKLDSRIVETVRGGGYRLGAPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 9e-31 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ygiX YP_691751.1 transcriptional regulator QseB BAC0487 Protein 1e-21 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ygiX YP_691751.1 transcriptional regulator QseB VFG0473 Protein 5e-25 44