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Name : ABO_0264 (ABO_0264) Accession : YP_691984.1 Strain : Alcanivorax borkumensis SK2 Genome accession: NC_008260 Putative virulence/resistance : Unknown Product : S1 RNA-binding domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 283751 - 286123 bp Length : 2373 bp Strand : - Note : S1 RNA binding domain protein identified by match to PFAM protein family HMMPF00575; Function unclear DNA sequence : ATGCGTAGTATCGAACAGATTATTGCCGAAGAAATCGGTTGCCAGGAACGCCAGGTCAACGCTGCCGTTGCCCTGCTCGA CGAAGGTTCCACCGTCCCCTTTATCGCCCGTTACCGCAAAGAGGTGACCGGCGGGCTGGACGACACCCAGCTGCGCAACC TGGAAGAACGGCTGCGTTATCTGCGCGAGATGGAAGAACGCCGCGAGACCATCCTGAAGAGCATCACCGAACAGGAAAAG CTTACCCCTGAACTGGAAAAAGCCATCAAGGCTGCCGACACCAAGACCCGGCTGGAAGATCTCTACCTGCCCTACAAGCC CAAGCGCCGTACCCGCGCCCAGATTGCCCGCGAAGCTGGCCTGGAACCGCTGGCTAACAGCCTAATAGATGATCCTACCC AGGACCCGGAAGCACTAGCCGCCGGTTACTTGAACGAGGAACACAAGATTGCCACCGCCAAGGACGCCTTGGACGGTGCC AAACAGATCCTCATGGAGCGTTTCGCTGAAGATGCCGAGCTGCTCACCCGCCTGCGCACCTTCCTCTGGGACAAAGGCCA AATTCAGGCCAAAGTGGTGGAAGGCAAGGAAAAAGACGGCGCCAAGTTCAGTGACTATTTTGATCACAGCGAAACCCTCA AAGGGATCCCCAGCCACCGCGCACTGGCCCTGTTTCGGGGCCGTAATGAGGGCATTTTGCATGTCTCAATGGTGCTGCCG GAAGAGTTGGAAAATGCTCAACCGCATCCCTGCGAAGCCATGGTCACTGCCGTAGCGGACTGGCAGCACGCCGGCCGGGC CGCCGATGATTGGCTCAAAGAAGTGATGCGCTGGACCTGGAAGATCAAACTCAACACTCATCTGGAAACCGAATTACTGG GCCGAGTGCGTGAAATGGGTGAAGAGGAAGCCATTCAGGTTTTCGCTCGTAACCTGAAAAGCTTGTTGATGGCCTCCCCC GCCGGCCCTAAATGCACCATGGGCCTGGACCCTGGCCTGCGTACCGGCGTGAAAGTGGTTGTCGTGGATGCCACCGGAAA GCTGCTGGAACACACCACCATCTTCCCTCACCAGCCAAAGAAGCAGTGGGATCAGTCCCTCAGTAAGCTGACTGCGCTGA GCAAACAGCATGGCGTGGAATTGATCGCCATCGGCAACGGCACTGCTAGCCGGGAAACCGACAAGCTGGCCGGCGAAGTG GTGAAATTGCTCAAGGATCAGCCGATCCAAAAAATTATCGTTTCTGAAGCCGGCGCCTCGGTCTACTCTGCCTCGGAAAT GGCGGCCCTGGAATTCCCAGAACTAGACGTGTCTTTCCGTGGCGCGGTATCCATTGCCCGCCGCCTGCAAGACCCACTAG CCGAGTTGGTAAAAATCGATCCGAAAGCCATCGGTGTTGGCCAGTACCAGCATGACGTAAGCCAGGTAAAATTGTCCCGC TCACTGGATACCGTGGTGGAAGACTGCGTGAACTCGGTGGGCGTGGATGTGAACACCGCCAGCGCCCCCTTGCTGGCCCG TATTGCCGGCCTTAACAGCACCATCGCCGGCAACATCGTTTCGTTTCGAGAGAAGAACGGCGCCTTTGCCAGCCGCGCCA ACCTGAAACTGGTGCCGCGCCTAGGCGACAAGACCTTTGAGCAAGCCGCTGGTTTCTTGCGCATCATGAACGGCGAAAAC CCGCTGGACCGCTCCTCGGTTCACCCAGAAGCCTACCCGGTGGTGGAAAGAATTGCCGAGCAGCATGGCCGCCCCCTAAA GGATCTAGTGGGTGATGTGCCGTTCCTGAAGAAGGTCAACGCTGCCGACTTCACCGACGATAACTTCGGCTTACCCACCG TCACCGACATTCTCAGTGAATTAGAAAAACCCGGCCGCGATCCGCGCCCGGAATTCAAAGCCGCGGTTCTCAAGGAAGGG GTGGAAACCCTCAAGGATCTCAAGCAAAACATGATCCTCGAAGGCACCGTCACCAACGTGACCAACTTCGGCGCCTTTGT AGATGTGGGTGTTCATCAGGACGGACTGGTGCACGTATCCGCACTGGCCGACAAATTCGTGGAAGATCCGCACCAAGTGG TCGCCCCCGGCGATATCGTTAAAGTGAAAGTGCTGGACGTGGATCTAGACCGCAAACGCATCAGCCTGACCATGCGCATG GGCGATCAACCCACGGAGAAACCCAGCGGCCAACGCCCCACCAGCAACCGCGCCAACCAAGCAAACAAAGGCAATAACCC ACGCCGTGGCGGTGGTAATGGTGGAGCTCAACGCGCTGGCGGCCAGCCCCAGGGCGGCGGCGGCACCTTCGCCGACCTAT TTGCCAAAGCTAAGGAAGAGAAGCAGAAGAAAGACAGCAAGAAGCGCTCCTGA Protein sequence : MRSIEQIIAEEIGCQERQVNAAVALLDEGSTVPFIARYRKEVTGGLDDTQLRNLEERLRYLREMEERRETILKSITEQEK LTPELEKAIKAADTKTRLEDLYLPYKPKRRTRAQIAREAGLEPLANSLIDDPTQDPEALAAGYLNEEHKIATAKDALDGA KQILMERFAEDAELLTRLRTFLWDKGQIQAKVVEGKEKDGAKFSDYFDHSETLKGIPSHRALALFRGRNEGILHVSMVLP EELENAQPHPCEAMVTAVADWQHAGRAADDWLKEVMRWTWKIKLNTHLETELLGRVREMGEEEAIQVFARNLKSLLMASP AGPKCTMGLDPGLRTGVKVVVVDATGKLLEHTTIFPHQPKKQWDQSLSKLTALSKQHGVELIAIGNGTASRETDKLAGEV VKLLKDQPIQKIIVSEAGASVYSASEMAALEFPELDVSFRGAVSIARRLQDPLAELVKIDPKAIGVGQYQHDVSQVKLSR SLDTVVEDCVNSVGVDVNTASAPLLARIAGLNSTIAGNIVSFREKNGAFASRANLKLVPRLGDKTFEQAAGFLRIMNGEN PLDRSSVHPEAYPVVERIAEQHGRPLKDLVGDVPFLKKVNAADFTDDNFGLPTVTDILSELEKPGRDPRPEFKAAVLKEG VETLKDLKQNMILEGTVTNVTNFGAFVDVGVHQDGLVHVSALADKFVEDPHQVVAPGDIVKVKVLDVDLDRKRISLTMRM GDQPTEKPSGQRPTSNRANQANKGNNPRRGGGNGGAQRAGGQPQGGGGTFADLFAKAKEEKQKKDSKKRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 61 |
