|
Name : xerC (ABO_2334) Accession : YP_694054.1 Strain : Alcanivorax borkumensis SK2 Genome accession: NC_008260 Putative virulence/resistance : Unknown Product : integrase/recombinase XerC Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4973 EC number : - Position : 2661121 - 2662044 bp Length : 924 bp Strand : + Note : identified by sequence similarity; InterPro: Phage integrase; High confidence in function and specificity DNA sequence : GTGGATAGCGATAGCCATAACACACTGCAAACGGTTAACACCTTCCTAACCCACTTGGCCAGCGAGCGTCGCCTCTCACC GCACACCGTAAACGGCTATCAACGGGACCTGATCGAAGCCCGAACATTACTCGGCAGCCAACCCTGGGACACCCTCACCG TCCACGACATGCGCAGCCTCGCCGCCTCGCTACACCGCCAAGGGAAAAGCGGCAAAACTATTCAGCGCATGCTTTCCACC CTGCGTACGTTTTTCCGTTACCTGATGCGTGAAGGGCTTGCCCGCGACAACCCGGCCATAGACATTCGCGCCCCGAAAAG CGGTAAACGCCTGCCCAAAGCACTGGATGTAGATCAAGTCAGCCATTTGCTGGATGCCGGCACCAGCAACAGCGAACCCC TAGCCCTGCGCGATCAAGCCATAATGGAACTGCTCTATGCCTGCGGCCTGCGTTTGGCCGAACTGCTTAGCCTAAACCTA GACAGCATTGATCTGCATGAAAGCCAACTGTTGGTCACCGGTAAAGGCAACAAGACCCGGCAACTACCAGTGGGAAAACC CGCCCTCACCGCCGTGCGCCGCTGGTTGCAAGTGCGTCCCATGCTGATCAAAAGCAGCGACCAGAACGCTCTTTTTATCA GCAAAAACGGCCGGCGGCTGTCTCCTTCCAGCGTACAACAGCGGCTTAAACGCCATGCTCTGGAGCGGGGGCTCGATGCC CATCTACATCCGCACAAATTACGCCACTCCTTCGCCACACACCTGCTGGAATCCTCCGGCGACTTGCGGGCAGTGCAGGA ACTGCTCGGCCACGCAGACTTGGCCACCACCCAGGTTTACACTCACCTGGATTTCCAACACTTAGCTCAGGTCTACGACG GAGCACACCCAAGAGCCCAGCGCCGCAAGGACGATGACGAATAA Protein sequence : MDSDSHNTLQTVNTFLTHLASERRLSPHTVNGYQRDLIEARTLLGSQPWDTLTVHDMRSLAASLHRQGKSGKTIQRMLST LRTFFRYLMREGLARDNPAIDIRAPKSGKRLPKALDVDQVSHLLDAGTSNSEPLALRDQAIMELLYACGLRLAELLSLNL DSIDLHESQLLVTGKGNKTRQLPVGKPALTAVRRWLQVRPMLIKSSDQNALFISKNGRRLSPSSVQQRLKRHALERGLDA HLHPHKLRHSFATHLLESSGDLRAVQELLGHADLATTQVYTHLDFQHLAQVYDGAHPRAQRRKDDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 8e-47 | 42 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 8e-47 | 42 |
