Gene Information

Name : algR (ABO_2323)
Accession : YP_694043.1
Strain : Alcanivorax borkumensis SK2
Genome accession: NC_008260
Putative virulence/resistance : Virulence
Product : alginate biosynthesis regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 2650854 - 2651594 bp
Length : 741 bp
Strand : -
Note : (Alginate biosynthesis regulatory protein AlgR) identified by sequence similarity; InterPro: Response regulator receiver domain Pfam N-terminus: response_rec, Response regulator receiver domain Pfam C-terminus: LytTr; LytTr DNA-binding domain; High confid

DNA sequence : 
ATGCGGGTACTTGTCTGCGACGACGAGCAACTGGCTCGCGACCGGCTGAAACGACTGGTCGACAAGATCGAAAACGCCGA
GGTGGTGGCTGAGGCGGGCAATGGCCGTGAAGCCATTATTGAGGCTCAGTCCTGTAAACCGGATGTGGTGTTAATGGATA
TCCGCATGCCGGAAATGGATGGAATGGAAGCGGCGGAGCATCTGAGCAAGATGGATAACCCGCCGGCACTGATTTTCTGT
ACGGCCTATGACGAGCATGCCCTGCAAGCGTTCCGTGTGCATGCGGTGGATTACCTGCTCAAGCCCGTTAATGCCGCGGA
TTTGACTGCCGCGCTTAACAAGGCGAAAACGCTCAATAGGATTCAGCTGGCAGAAATTAGTGGCGAAGTGAGTGAGGACA
AGCCGCGTCGTCGAGGCCATATCAGCGCTCGCACCCATCGGGGGCTGGAGCTGGTGCCGGTGAACTGCGTGCGTTATTTC
CTGGCAGATCAGAAATACGTGACGGTGTGCTTTAGCGAAGGCGAAGTGCTGATTGATGAAACCCTCAAAGAATTGGAAGC
CGAATTCGGTGATCAGTTCGTACGTATTCACCGCAATGCACTAGTGGCTCTGAACTTTATTGAAGGTATGGAAATGGCCA
CCGCAGGCCACCATCAGGTTCGCCTGCGCGGGGTGGATGAGCGATTGACTGTGAGCCGGCGCCATGTGGCTGGGTTGCGC
CGAGTGTTGCAGAATCTTTAA

Protein sequence : 
MRVLVCDDEQLARDRLKRLVDKIENAEVVAEAGNGREAIIEAQSCKPDVVLMDIRMPEMDGMEAAEHLSKMDNPPALIFC
TAYDEHALQAFRVHAVDYLLKPVNAADLTAALNKAKTLNRIQLAEISGEVSEDKPRRRGHISARTHRGLELVPVNCVRYF
LADQKYVTVCFSEGEVLIDETLKELEAEFGDQFVRIHRNALVALNFIEGMEMATAGHHQVRLRGVDERLTVSRRHVAGLR
RVLQNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 2e-65 53
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 2e-65 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
algR YP_694043.1 alginate biosynthesis regulator VFG0119 Protein 7e-59 54