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Name : ribD (ABO_2174) Accession : YP_693894.1 Strain : Alcanivorax borkumensis SK2 Genome accession: NC_008260 Putative virulence/resistance : Unknown Product : (S)-2-hydroxy-fatty-acid dehydrogenase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 2483014 - 2484147 bp Length : 1134 bp Strand : - Note : (riboflavin biosynthesis protein RibD) identified by sequence similarity; InterPro: Riboflavin biosynthesis protein RibD; High confidence in function and specificity DNA sequence : ATGAGTTTTTCGGCTGCCGACCACCAGTACATGGCTCGAGCGTTGCAGTTGGCACGTCGTGGGCTGTATACCACGGACCC TAATCCGCGGGTAGGGTGCGTGTTGGTGCGTGATGGCGCGGTGGTTGGTGAGGGTTTTCATGCCCGCGCCGGGACTCCCC ACGCCGAGCGTCATGCACTGGCACAAGCCGGTGAGCGGGCGCGGGGCGCTACTGCCTATGTGACCCTGGAGCCCTGCTCT CACACTGGGCGCACCGGCCCCTGTGCTGATGCGCTAATCGATGCCGGCGTCACGCGGGTGGTGGCTGCCATGGAAGATCC GAATCCGCTGGTGGCGGGGCAGGGTTTGCAGCGCTTGGCGGATGCGGGAATCGCCACTGCAGTCGGTTTGCTGGAAGCGG AGGCCCGAGCCCTGAATCCGGGTTTTGTTTCCCGCATGACCCGTCAGCGTCCCTATATCCGTATCAAGATTGCCGCCAGC GTGGACGGGCGCACCGCCATGGCCAATGGCGAATCCCAGTGGATTACCGGCCCAGCCGCCCGCGAAGACGTGCAGCGTCT ACGCGCGCGCAGCTCTGCGGTGATAACCGGTGTGGGTACGGTGCTGGCGGATCGACCCTCTTATACAGTGAGGCCTAGAC AGTGGCGCTTGGCCGAATACCGCCAGCATGCGGCTGACGACGATTGGGTGCGACAGCCTCTGCGGGTGATTCTAGATCGC ACCCTACGCACGCCGCCGGATGTGCCGGTGGTCAGCGCCTTAGGGCATTGTTTGTTGGTGGCAGGGGAACAACACCCAGG ACGCCAGAATGCGCTGGAGTCCGCCGGTGCGGAAGTAATGCTCTTGCCCGCCTCCGGTTCCGGGATCGACTTGCAGCAGT TGTTAATCGAATTGAACCGGCGCGAATGTAACGAAGTGCTGGTAGAATGTGGCGCCACACTGGCCGGTGCCTTTGTTCGC GAGGGTTTGTTCGACGAAATTCTTGTGTATATGGCGCCAACTCTGCTGGGTTCGTCCGCCCGGCCGTTATTGGGGTTGCC GCAACTGGCCAGCATGAGTGAGAAAGTGGCGCTGAAATGGCAGGATGTGCGCCAAGTTGGTGATGATCTGCGTCTGACGC TGGTTTCGGCCTGA Protein sequence : MSFSAADHQYMARALQLARRGLYTTDPNPRVGCVLVRDGAVVGEGFHARAGTPHAERHALAQAGERARGATAYVTLEPCS HTGRTGPCADALIDAGVTRVVAAMEDPNPLVAGQGLQRLADAGIATAVGLLEAEARALNPGFVSRMTRQRPYIRIKIAAS VDGRTAMANGESQWITGPAAREDVQRLRARSSAVITGVGTVLADRPSYTVRPRQWRLAEYRQHAADDDWVRQPLRVILDR TLRTPPDVPVVSALGHCLLVAGEQHPGRQNALESAGAEVMLLPASGSGIDLQQLLIELNRRECNEVLVECGATLAGAFVR EGLFDEILVYMAPTLLGSSARPLLGLPQLASMSEKVALKWQDVRQVGDDLRLTLVSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 2e-67 | 49 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 2e-67 | 49 |
