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Name : rci (ABO_2064) Accession : YP_693784.1 Strain : Alcanivorax borkumensis SK2 Genome accession: NC_008260 Putative virulence/resistance : Unknown Product : shufflon-specific DNA recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 2352446 - 2353549 bp Length : 1104 bp Strand : + Note : identified by sequencesimilarity; InterPro: Phage integrase; High confidence in function and specificity DNA sequence : ATGGCTACACTCGTCAAAACCCCTTCCGGCACATGGAAAGCCGTCATTCGCAAAACGGGGTTCCCCACTACCTCAAAAAC CTTTCGCACCAAACGCGATGCTGAAGATTGGTCGCGACGCACCGAAGATGAAATGGTGCGCGGTGTTTACATCCAACGCG CCCCCGCAGAAAGAATGACCGTGGCGGATGCACTCAAGCGCTACCTGGCGGAAGTCTCCCCAACCAAGCGCCCGGCTTCA GCAGCCTGCGACGTTCGACATTCCAAACCTCTAATCAAAGGACTGGGCAAATACTCGTTAGCAGCACTGTCCCCTGAGAT TATCGCCAAGTATCGCGATGAACGCCTTGCTGGCCTGGACCGCAAAGATGCCAAGGGCAATCCTGATCCAAGACCGCGAT CACCCAACACGGTAAGACTCGACCTTGCGTTGCTCGGGCATATGTTCACCACCGCTATCAGGGAATGGGGAATCGGCCTG CCGTCCAATCCTGTACAAAATATTCGTCGCCCTGCCCCGCCACCTGGACGCGAGCGCCGACTAAACCAAACGGAAGAAGA TCGCCTTATAGCTGCGGTCGATAGCCACTCCAACCCCATGCTGGGCTGGATCGTCCGGCTTGCCCTAGAAACCGGGATGC GCTCAGCAGAGATCACCACGTTACGTCGCAACCAAATCGACCTGAAGCGACGGGTCGTACGCTTACTGGAAACCAAGAAC ACAGCACCACGTACCGTCCCACTCTCCAGCACAGCGACAGCCATACTGCAGGAAGCTCTAGCCAATCCAGTTCGCCCCAT CGACACAGATCTGGTGTTCTTTGGGGAACCAGGTAGAGACGGCCAGCGCCGCCCCTATAACTTCAACAAACCCTGGCTAA AAGCGAAGGAAACCGCCGGAATGAAAGAGCTCCACTTCCACGACCTGCGTCATGAAGCCGTAAGCCGGTTAGTCGAAGGG GGGCTCAGCGACCAGCAGGTGGCCGCCATCAGCGGCCACAAGTCCATGCAGATGCTGAAACGATACACCCACCTGCGCGC GGAAGACCTAGTGAACGAGCTTGACTCAATCGCTGATCGCCGTAACCGAAGAGATGAATCGTGA Protein sequence : MATLVKTPSGTWKAVIRKTGFPTTSKTFRTKRDAEDWSRRTEDEMVRGVYIQRAPAERMTVADALKRYLAEVSPTKRPAS AACDVRHSKPLIKGLGKYSLAALSPEIIAKYRDERLAGLDRKDAKGNPDPRPRSPNTVRLDLALLGHMFTTAIREWGIGL PSNPVQNIRRPAPPPGRERRLNQTEEDRLIAAVDSHSNPMLGWIVRLALETGMRSAEITTLRRNQIDLKRRVVRLLETKN TAPRTVPLSSTATAILQEALANPVRPIDTDLVFFGEPGRDGQRRPYNFNKPWLKAKETAGMKELHFHDLRHEAVSRLVEG GLSDQQVAAISGHKSMQMLKRYTHLRAEDLVNELDSIADRRNRRDES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13530.1 | site-specific recombinase | Not tested | PAGI-8 | Protein | 8e-114 | 65 |
