Gene Information

Name : ABO_2001 (ABO_2001)
Accession : YP_693721.1
Strain : Alcanivorax borkumensis SK2
Genome accession: NC_008260
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2288921 - 2289586 bp
Length : 666 bp
Strand : -
Note : (Transcriptional regulatory protein, ) identified by match to TIGR protein family HMMTIGR01387 InterPro: Response regulator receiver domain; Family membership

DNA sequence : 
ATGCGCCTATTGCTGGTTGAGAATGATGTGCTGCTAGCAGATGGCCTGCAACGTGCGCTCCGGGCTGAAGGCTATACGGT
GGATCATATCGATCGGGGTGATCTGTTGATGCCGGCTCTGGAGGGCGGAGGTTTTCAACTGGTGTTGCTGGATCTGGGAC
TGCCCGGGCTGGATGGTATTGATGCCTTGAAAATCTTGCGGCAAAAGGACAAACAGATCCCGGTAATCATTATTAGTGCC
AGAGATGCACTGGAAGACCGCATCGGGGGCTTGGATTGTGGCGCCGATGATTATCTGGTGAAACCGTTCTCCGCTGTGGA
GATGATTGCGCGGATTCGTGCCCGATTACGGCGTCGTGAACCGCCTGGCTCAGAGACGCTTCATCTCGGTGAGCTGGAGA
TTGATCCTGTGCGTTTTATCGTCACTCGTCGCGGCGAGCTGGTAAATCTGTCGCGGCGGGAGATGAGCCTGTTGATGCAG
CTGTTGCGCCATCGGGGTCGAGTTCTCACCAGAGATCAACTGGAGGGTGGGTTGTATGGCTGGAATGAGGATGTAGAAAG
CAACGCACTGGAAGTCCACATACATCATTTGCGTAAAAAGTTGGGAAGCGACTTGATTCGGACTGTGCGTGGTGTCGGCT
ACAGCCTGCAGGGAACTATGGAATGA

Protein sequence : 
MRLLLVENDVLLADGLQRALRAEGYTVDHIDRGDLLMPALEGGGFQLVLLDLGLPGLDGIDALKILRQKDKQIPVIIISA
RDALEDRIGGLDCGADDYLVKPFSAVEMIARIRARLRRREPPGSETLHLGELEIDPVRFIVTRRGELVNLSRREMSLLMQ
LLRHRGRVLTRDQLEGGLYGWNEDVESNALEVHIHHLRKKLGSDLIRTVRGVGYSLQGTME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-24 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABO_2001 YP_693721.1 transcriptional regulatory protein VFG0473 Protein 2e-28 46
ABO_2001 YP_693721.1 transcriptional regulatory protein VFG0596 Protein 5e-18 41