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Name : mutS (ABO_1809) Accession : YP_693529.1 Strain : Alcanivorax borkumensis SK2 Genome accession: NC_008260 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 2060042 - 2062621 bp Length : 2580 bp Strand : + Note : identified by match to PFAM protein family HMMPF01624 InterPro: DNA mismatch repair protein MutS family N-terminal domain; High confidence in function and specificity DNA sequence : GTGACCGCGGACCTAAGCCAACATACGCCGATGATGCAGCAATACCTCGGCATTAAGGCCGAACACCCGGACCAGCTGGT GTTCTACCGCATGGGGGATTTCTATGAGTTGTTCTTTGGCGATGCGCAGAAAGCGGCGCGACTGCTGGATATCACGCTGA CCCAACGCGGTCAAAGTGCCGGCAAGCCGATTCCCATGGCCGGCATTCCCTACCACGCGGCGGAGAACTACCTGGCGCGG CTGGTGAAGCTGGGCGAATCCGTGGCCATTGCCGAACAAATCGGTGACCCGGCGCTGGCCAAGGGGCCGGTGGAGCGCAA GGTGGTTCGCATCGTCACGCCCGGTACGGTGAGCGATGAGGCCTTACTGGAAGAGCGTCGGGATAATTTATTGTGCGCGG TTTTCGACCATAATAATCAATACGGTTGCGCCAGCCTGGATTTGGCCGCCGGGCGTTTTCTCGTCACTCAAGTAGAAGGT GCCGAGCAATTACAGGCCTTGCTGGAGCGTTGGTCGCCAGCGGAATTGTTGATCAGTGAAGAGCATGGTCTGCCGGGGCG CTGGTCCGATCGACCGGGTACTCGTAAACGTCCGAGCTGGGAGTTTGATGAAGACGCTGCCCGTCGCCAGCTGTGCCAAC AGTTCCAGGTGCAGGATCTGGCCGGCTTTGGTGAGCCATCTCCCGTGGCGGTTTCCGCCGCTGGCGCACTGCTTGGCTAT GCCAAGGAAACCCAGCGCGGCGAACTCCCACATATCACCGGCCTAACAGTAGAAAGCTTTGATGATGCGGTCGCCATGGA TGCAGCCACCCGCCGTAACTTGGAGCTGACTGAAACCCTGGATGGCCAGGAGCAACACACCCTGGCCTGGGTGCTGGACA GCACCAAAACTGCCATGGGCGCGCGCTTACTTAAACGCTGGGTACACCAGCCATTGCGCAACCGCACCACGCTCACCCAG CGGCAGGACCAGATCGACGCCCTGCGTCAGGGCTGGTGCTTTGAGTCCGCCCGCGATGTGCTTAACGACATCGGCGACAT GGAACGCATTCTCGGCCGGGTGGCGTTACGTTCTGCTCGCCCTCGGGACCTGACGCGCCTGCACGCCAGCCTCAAAGCGC TGCCGCCTCTAATCGGCACCCTACCCGCCGCCGATTGTTTTTGCGAATTGATTGAGCGCATCGGCCAGTTTCCGAACCAG GTGGAATTGCTGGGCACGGCGGTGATCGAGAATCCGCCCATGCTGATACGCGACGGCGGCGTCATTGCTCCCGGTTACAG TGAAGAGCTGGATGAGCTGCGTTCCATCAGCGAAAACGCCGGTGCGATTTTAGTGGATATCGAAACCCGCGAGCGCGAAC GAACCCAGCTTTCCACCCTGCGCGTGAAGTACAACCGCGTGCATGGCTATTACATTGAGCTGTCGCGACGCGAGTCCGAT CAGGCGCCGACAGATTATCAACGCCGTCAAACACTGAAAAATGCTGAACGGTTTATCACTCCCGAACTGAAAGAATTTGA GGACAAGGCCCTGTCCGCGTCCAGCAAAGCTCTAGCGCTGGAGAAACGCCTCTACGAAGCACTACTGGAAAAAGTGGCCG CCGACCTGCACGCCCTTCAGCGCAGTGCTGCCGCCGTGGCCGAGCTCGATGTGCTGGCATCGCTGGCCGAACGGGCCGAA GCACTCAACTGGGTGCTCCCACAGTTAGTAGATGACGAAGCGATCATCGAAATTGTGGATGGCCGTCACCCGGTGGTGGA ACAGGTGCTAGACGACGCGTTCGTTCCTAACAGCCTGCACTTAGACAATGCCCGCCGTATGGTGATCATTACCGGCCCCA ACATGGGCGGTAAATCCACCTACATGCGCCAAACCGCCCTGATCGCGCTGCTCGCTCACCTTGGCAGCTGTGTGCCGGCG GCCAGTGCCCGCATCGGTAGCCTGGACCGGATCTTCACCCGCATTGGCTCGTCCGATGATCTGGCCGGTGGCCGCTCCAC CTTTATGGTGGAAATGTCAGAAACCGCCAACATCCTCAACAACGCCACCGCCCAAAGCCTAGTACTGATGGACGAGATTG GCCGCGGCACCAGCACTTTTGATGGCCTTAGCCTGGCCTGGGCTGCCGCCGAGCACCTAGCGCGCAATCTCAAGTCGTTT ACCCTGTTCGCCACACACTACTTCGAGTTGACTCAACTACCAGAGCAACTGCCGGGCATCTACAACGCACACCTGACCGC CAGCGAACACGATAACCGCATTGTCTTTCTGCACCGAGTACAAGAAGGACCGGCCAGTCGCAGTTACGGTCTTCAGGTAG CCCAACTGGCGGGAGTGCCGAGCAGCGTGATCCATAGAGCCGGTGAGAAATTACGCGAGTTGGAACAAAGCAAACCGCTG GCGCCTTCAGCCACTCCCCCCAGCAGCTATGCCGCCCCATCACCGGCGGCGGCTCCGGCCCAGGCCTCACTATTCAACGA ACCCAATGCGATCGAGCTAGCGTTGACCGATCTAGACCCAGACGAGCTGACACCAAAGCAAGCCCTGGAGGCGCTATATA CATTGAAAAAGCTGACTTAA Protein sequence : MTADLSQHTPMMQQYLGIKAEHPDQLVFYRMGDFYELFFGDAQKAARLLDITLTQRGQSAGKPIPMAGIPYHAAENYLAR LVKLGESVAIAEQIGDPALAKGPVERKVVRIVTPGTVSDEALLEERRDNLLCAVFDHNNQYGCASLDLAAGRFLVTQVEG AEQLQALLERWSPAELLISEEHGLPGRWSDRPGTRKRPSWEFDEDAARRQLCQQFQVQDLAGFGEPSPVAVSAAGALLGY AKETQRGELPHITGLTVESFDDAVAMDAATRRNLELTETLDGQEQHTLAWVLDSTKTAMGARLLKRWVHQPLRNRTTLTQ RQDQIDALRQGWCFESARDVLNDIGDMERILGRVALRSARPRDLTRLHASLKALPPLIGTLPAADCFCELIERIGQFPNQ VELLGTAVIENPPMLIRDGGVIAPGYSEELDELRSISENAGAILVDIETRERERTQLSTLRVKYNRVHGYYIELSRRESD QAPTDYQRRQTLKNAERFITPELKEFEDKALSASSKALALEKRLYEALLEKVAADLHALQRSAAAVAELDVLASLAERAE ALNWVLPQLVDDEAIIEIVDGRHPVVEQVLDDAFVPNSLHLDNARRMVIITGPNMGGKSTYMRQTALIALLAHLGSCVPA ASARIGSLDRIFTRIGSSDDLAGGRSTFMVEMSETANILNNATAQSLVLMDEIGRGTSTFDGLSLAWAAAEHLARNLKSF TLFATHYFELTQLPEQLPGIYNAHLTASEHDNRIVFLHRVQEGPASRSYGLQVAQLAGVPSSVIHRAGEKLRELEQSKPL APSATPPSSYAAPSPAAAPAQASLFNEPNAIELALTDLDPDELTPKQALEALYTLKKLT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_693529.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 59 |
