Gene Information

Name : tnpA (ABO_1808)
Accession : YP_693528.1
Strain : Alcanivorax borkumensis SK2
Genome accession: NC_008260
Putative virulence/resistance : Unknown
Product : transposase A
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 2059483 - 2059761 bp
Length : 279 bp
Strand : +
Note : transposase OrfA identified by match to PFAM protein family HMMPF04218 InterPro: Transposase IS911 HTH and LZ region; Family membership

DNA sequence :
ATGAGCAGCAAACGCTATCCCGAAGAATTCAAGATTGAGGCGGTTCGTCAGGTGACGGATCGTGGTCACAGCGTAGCCCA
AGTGGCTGATCGACCCGGTGCCACTACCCACAGTTTGTACGCCTGGATCAGGAAATTTGGCCCGGATTCCGAGCAGCATC
AGGCTAAGACCGATGACCTGGCAGAGATCCGCCAGCTCCAGAAAGAGCTTAACCGCGTTACCGAAGAGCGTGACATCCTA
AAAAAAGCCGCGGCGTACTTTGCTAGTCAGTCCGATTGA

Protein sequence :
MSSKRYPEEFKIEAVRQVTDRGHSVAQVADRPGATTHSLYAWIRKFGPDSEQHQAKTDDLAEIRQLQKELNRVTEERDIL
KKAAAYFASQSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXB21 ABD94708.1 putative transposase Not tested ExoU island B Protein 5e-15 48