Gene Information

Name : recG (ABO_0168)
Accession : YP_691888.1
Strain : Alcanivorax borkumensis SK2
Genome accession: NC_008260
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : 3.6.1.-
Position : 176457 - 178568 bp
Length : 2112 bp
Strand : -
Note : identified by sequencesimilarity; InterPro: ATP-dependent DNA helicase RecG; High confidence in function and specificity

DNA sequence :
ATGGCCGGTGACTCCCTCTCCAGCCTACCCCTGAGCCGCCTCAAGGGCGTCGGCCCCGCCGCTGCGGAAAAACTGGCCAA
GCTGGGCCTGCATAACCTAGAAGATCTGCTCTTCCACCTACCGTTCCGTTACGAAGACCGCACTCGCATTTCCCCCATCG
GCAGCCTGCGCCCGGAAACCGGCGTGGTCATCGAGGGTCAAGTAATGGCCGCCGATGTGATATTTGGCCGACGTCGCTCC
CTGCTTTGCAAAGTGGCTGACGGCACCGGCATGGTGACGCTGCGTTTCTACCATTTCAGCGCAGCACAGAAGAACACCCT
AGAGCGCGGGCGGACTATTCGCGTCTATGGCGAGCCCCGTCCTGGTTCCGCCGGGCTGGAATTTTATCATCCAGAATACC
AGCTAGATTATGCTGACAGCGGCCTGCCGCCACTGGAAAAAGCATTGACCCCGGTCTACCCCACCACCGACGGTGTCAGT
CAGAAAACCCTGCGCAACCTCACCGGGCAGGCCCTGAAATACCTACAGGCGCACCCTCCCCAAGAGCTGATTCCTGCCCA
ACTGCTGGATCAGAGCGGCCTGCCCAGCTTAGCCGACGCCTTGAGCAAACTGCATAATCCACGACCAGATGACCCGGTGA
ACTTACTGCTGGAAGGCAAACATCCGGCAGTAAAACGGCTGGTGATGGAAGAAATGGTGGCTCACCAATTAGGCATGCTG
CAAAAACGCGCCGGACAGAAAGCCTTCCATGCCCCGCGCCTTGGCGGGCAGACACTGTTTGAAAAACTACAGGATAGCCT
ACCCTTTAACCTCACTGGCGCCCAAAAACGAGTCATCGGTGAGCTGATGGGCGACATGAAACAAGCCCACCCCATGTTAC
GTCTGGTACAAGGCGATGTGGGCTCAGGCAAAACCCTGGTAGCCGCCGCCGCCGCCCTTGCCGCCATTGAGTCCGGCTAT
CAGGTCGCGTTAATGGCACCTACGGAGCTGCTGGCGGAACAGCATCGGGAAAACTTCCACCACTGGCTGGCGCCACTGGG
TATAAAAGTACACTGGCTGGCGGGCAGCCTCGGCGTAAAAGCCCGCCGGGAAACCAACGCAGCGCTAGCCGATGGCAGTG
CGCACATCGTGGTCGGCACCCATGCTTTGTTTCAGGAGGCCGTACAGTTCCATCGCCTTGGGCTCACCATCATTGATGAG
CAGCACCGCTTCGGTGTGCAGCAGCGGCTGGCCCTGCGTGAAAAAGGGCGCGAGGATAACGCCCATGGCATTCAGGTTCC
CCACCAATTAGTCCTCACCGCCACGCCCATTCCCCGCACCCTGGCCATGAGCGTCTATGGCGATCTGGACACATCCGTGA
TCGACGAAATGCCACCGGGCCGCAAGCCCATCGACACCTTGGTGCTTCCCGAGAGCCGACGCCCCCAAGTAATCGAACGC
ATTAACGATGCCTGCCGTCCCTCTGCTAAAAAGAAAAACACTCAGGCCTACTGGGTCTGCACTTTAATTGAGGAGTCTGA
AGAACTGCAGGCTCAGGCAGCGGAAGCAACATTTGCGGAATTACAGATCGCCTTGCCGGAGCTGAAGGTGGAGCTGGTAC
ACGGGCGCATGAAGGCGAAAGAAAAAGCCGAGCGTATGGCACGTTTTTCGCGGGGAGAAGCGCAATTGCTGATTGCCACC
ACCGTCATCGAAGTGGGCGTGGATGTACCCAACGCCACCCTCATGGTAATGGAAAACGCCGAACGGTTGGGCCTCGCGCA
GTTACACCAGTTACGCGGTCGCGTAGGCCGTGGAGCCGAGCAAAGCTACTGTTTACTGCTATACAAAAACCCTCTATCGC
ATACTGGCAAGCGACGCCTGGCGGTAATGCGCGATACCACCGACGGTTTTGTGATTGCCGAAGAAGATTTGAAACTACGT
GGACCCGGCGAATGGCTGGGCACTCGCCAGACCGGCGACCTGGCCTTTCGCATCGCCGATCTGGTTCGTGATGAAGCGTT
AATGGAGCCCGCCAAAGAGATCGCCAACAAACTAATGCAAGACTACCCACAGTGGATCGACCCCCTGTTACGTCGCTGGC
TAAAGGGCGGGCAGAACTTTGCCGACATCTGA

Protein sequence :
MAGDSLSSLPLSRLKGVGPAAAEKLAKLGLHNLEDLLFHLPFRYEDRTRISPIGSLRPETGVVIEGQVMAADVIFGRRRS
LLCKVADGTGMVTLRFYHFSAAQKNTLERGRTIRVYGEPRPGSAGLEFYHPEYQLDYADSGLPPLEKALTPVYPTTDGVS
QKTLRNLTGQALKYLQAHPPQELIPAQLLDQSGLPSLADALSKLHNPRPDDPVNLLLEGKHPAVKRLVMEEMVAHQLGML
QKRAGQKAFHAPRLGGQTLFEKLQDSLPFNLTGAQKRVIGELMGDMKQAHPMLRLVQGDVGSGKTLVAAAAALAAIESGY
QVALMAPTELLAEQHRENFHHWLAPLGIKVHWLAGSLGVKARRETNAALADGSAHIVVGTHALFQEAVQFHRLGLTIIDE
QHRFGVQQRLALREKGREDNAHGIQVPHQLVLTATPIPRTLAMSVYGDLDTSVIDEMPPGRKPIDTLVLPESRRPQVIER
INDACRPSAKKKNTQAYWVCTLIEESEELQAQAAEATFAELQIALPELKVELVHGRMKAKEKAERMARFSRGEAQLLIAT
TVIEVGVDVPNATLMVMENAERLGLAQLHQLRGRVGRGAEQSYCLLLYKNPLSHTGKRRLAVMRDTTDGFVIAEEDLKLR
GPGEWLGTRQTGDLAFRIADLVRDEALMEPAKEIANKLMQDYPQWIDPLLRRWLKGGQNFADI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 9e-97 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
recG YP_691888.1 ATP-dependent DNA helicase RecG BAC0356 Protein 7e-179 58