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Name : ABO_1582 (ABO_1582) Accession : YP_693302.1 Strain : Alcanivorax borkumensis SK2 Genome accession: NC_008260 Putative virulence/resistance : Unknown Product : DNA-damage-inducible protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 1805602 - 1806888 bp Length : 1287 bp Strand : - Note : involved in uv protection and mutation. InterPro: UMUC family (DNA-repair) Pfam: impB/mucB/samB family; Family membership DNA sequence : ATGTTTGCGCTGGTTGATTGCAATAGCTTCTATGCCGCTTGTGAGCGTCTGTTTCGCCCGGACCTGCAGGGCAGGCCGGT GGTGGTGCTGTCGAATAATGATGGCTGCATTGTGGCTGGGTCTGCGGAAGCCAAAGCGTTGGGGGTGAAAACCGGGATGC CGCTGTTCCAGGCCCACGACTTGATCCGTGGGCACAAAGTGGCGGTGTTTTCTTCCAACTATGCCCTGTATGGGGATATT TCCCAGCGGGTGATGGCGACCTTGGAAACCCTGGCACCTCGGGTAGAAGCCTATTCCATTGATGAGGCGTTTCTGGATGT GTCGTTGATGAAAACGGCTGAACTACAGCCCCTGGCCCTGCAGATTCGCGCACGTATTGATCGCTGGGTGGGCGTGCCGG TGTGTGTGGGGGTTGCGCCCACTAAGGTGTTGGCCAAGTTAGCCAACCATGCGGCCAAGCGTTATCCGGCCACGGGCGGC GTGGTGGTGCTCAGCGATCCCTTGCGGCGCGACAAATTGTTGTCGTTAACCCCGATTTCCCAGGTATGGGGGGTCGGGCG GCGGTTACGTGGGCGCTTTGAGGCGCTGGGCATCAACACGGCGCTGGATCTGGCCCGGGCCGATGTCGGGATGATCCGCC AGCGTTTTTCCGTGGTGCAGGAACGGTTGGTGCGGGAGCTGAACGGGGAGCCTTGCTTGTCTTTAGACACCCAGCCTTCG CCCCGTCAGCAAGTGATTTATTCCCGTTCTTTTGGTGAGCCGGTGGCGGCATTGCCGCCGTTGCGCCAGGCACTGAGTGA TTTTGTTTCCCGGGCCATGGAGTCTCTGCGTAAGGAGGGGCTATATGCCGGCCGGGTGACGGTGTATTTGCGCACCGCCC CCATGGGCAAACCACAGCAGTTGTTCCCGGATACGCTCAGTGCCGTGTTGTCGCCAGCCACGGCAGATACCCGCTTGGTG GTGCGTCAGGCGCAGGCGTTGCTAGCGCAGTTATGGTGGCCGGGCTATCGCTATGGCAAGGCGGGCGTGATCCTCACGGA TCTGCGCGGGCGTGATCAGGTGCAGTGCGGATTATTTGCCGAGCAGAAACCCGCAGAGCAGGAGACTGGCCGGCGCGGGG AAGCGTTAATGGCCGTCATGGATAGCATCAACCAGAGTGGCGTGGGCAAGGTGTGGTTGGCGGGGCGAGGAATGCAGGGG AATCAGCACAGTACCTGGGCCATGCGCAGGGCGCATCTGTCTCCGGCCTATACTAGCCGCTGGTCTGATTTGCCGGTGGT GCGTTAG Protein sequence : MFALVDCNSFYAACERLFRPDLQGRPVVVLSNNDGCIVAGSAEAKALGVKTGMPLFQAHDLIRGHKVAVFSSNYALYGDI SQRVMATLETLAPRVEAYSIDEAFLDVSLMKTAELQPLALQIRARIDRWVGVPVCVGVAPTKVLAKLANHAAKRYPATGG VVVLSDPLRRDKLLSLTPISQVWGVGRRLRGRFEALGINTALDLARADVGMIRQRFSVVQERLVRELNGEPCLSLDTQPS PRQQVIYSRSFGEPVAALPPLRQALSDFVSRAMESLRKEGLYAGRVTVYLRTAPMGKPQQLFPDTLSAVLSPATADTRLV VRQAQALLAQLWWPGYRYGKAGVILTDLRGRDQVQCGLFAEQKPAEQETGRRGEALMAVMDSINQSGVGKVWLAGRGMQG NQHSTWAMRRAHLSPAYTSRWSDLPVVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 9e-95 | 49 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 9e-95 | 49 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 9e-81 | 44 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 1e-60 | 42 |
