Gene Information

Name : ABO_1401 (ABO_1401)
Accession : YP_693121.1
Strain : Alcanivorax borkumensis SK2
Genome accession: NC_008260
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1595397 - 1596074 bp
Length : 678 bp
Strand : +
Note : polyamine ABC transporter ATP-binding protein identified by match to TIGR protein family HMMTIGR01187 InterPro: AAA ATPase superfamily; Family membership

DNA sequence :
ATGAATACAACGTCTCCCGTTTTGCTTGCCCACAATCTTTGTAAGCGTGTTCAAGGCCCAGAGGGCGGGCTCGATTTGTT
GCAGGGTATCACGCTTGAAGTCAATGCCGGTGACAGCCTTGCAATTACCGGCCCTTCCGGTTCCGGCAAGTCCACTCTAC
TGTCATTACTCGCTGGTCTCGATGTACCCACCAGCGGTGACGTGCAACTGGGCGGTGTCTCATTCAGCCAGGCCAATGAA
GATGAGCGGGCACGATTGCGCGGCGAGCAATGCGGTTTTGTCTTCCAGCATTTTCAGCTAATCAATGATTTAACTGCGCT
AGAGAATGTGATGTTACCGTTGGAAATACTCAACCGTGACCATCGCCGGGAACAGGCTATGCACTGGTTGGAACAGGTGG
GGCTGGGGCGTCGTCAGCACCACTTCCCGGCACAACTTTCTGGCGGCGAACAACAGCGCGTCGCCCTGGCCCGGGCTTTT
GTGGTCTCCCCGGCGCTACTGTTTGCCGACGAACCCACCGGCAGCCTGGATTTCGCCAACGGCGAGCATGTGGCCGATTT
ATTGTTTTCGCTGAATGCAGAACAGAAAACCGCGTTAGTGCTGGTCACCCACGACCCTCAACTGGCGGCACGCTGTGAGC
GCTCGGTTTGCCTGGCGGAGGGCCGGCTCAGTGTTTAA

Protein sequence :
MNTTSPVLLAHNLCKRVQGPEGGLDLLQGITLEVNAGDSLAITGPSGSGKSTLLSLLAGLDVPTSGDVQLGGVSFSQANE
DERARLRGEQCGFVFQHFQLINDLTALENVMLPLEILNRDHRREQAMHWLEQVGLGRRQHHFPAQLSGGEQQRVALARAF
VVSPALLFADEPTGSLDFANGEHVADLLFSLNAEQKTALVLVTHDPQLAARCERSVCLAEGRLSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-26 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-26 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-26 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABO_1401 YP_693121.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-32 45
ABO_1401 YP_693121.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-28 45