|
Name : ABO_1368 (ABO_1368) Accession : YP_693088.1 Strain : Alcanivorax borkumensis SK2 Genome accession: NC_008260 Putative virulence/resistance : Resistance Product : cation efflux system permease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1230 EC number : - Position : 1556832 - 1557728 bp Length : 897 bp Strand : + Note : (Cation efflux system permease, ),identified by sequence similarity; InterPro: Heavy-metal-associated domain; High confidence in function and specificity DNA sequence : ATGAGCAAATCCTGTGGTGGCGCCTGTGGCGGTGATGCAACGTCCGCAGCGGATACCGATATACAGGCCTCCTCCGAGGC GCCAGGGAGATGGGTCAGTGTTTATGCCGTGCCGAAGATGGACTGTCCATCAGAAGAACGAATGATTCGCCTAGCCCTGA ACGGCTTTGAGGAGATTCGGGCGCTGTCCTTCGACTTGTCGAACCGCCGGCTGAAGGTCGTGCATGACGGCGAGGTCGAG CCCGTCACCTCGAAACTGAAGACCTTGGGGCTAGGCGCCTCGCTTCAGGAAACCGTCGCTGCAAATCCGGAGACCATCAA GGCCGCCGAGTTTTCGGCAGCTTCTGCTAAGCAAGAATCCGGGACCCTGCGCTGGTTGCTCGGCATCAATGCACTTCTGT TCGTGGTGGAAATGACTGCCGGTCTGATCGCCCAGTCCACCGGCCTGATTGGAGAATCCCTGGACAATTTTGCCGATGCG GCGGTGTACGGGCTTGCCCTTTATGCGGTTGGACATAGCGTGAAAATGCAGGTACGTGCCGCGCATCTTGCTGGTGTACT GCAACTGATCTTGGCTGTGGGCGTGCTCGTAGAGGTGGTGAGACGCTTTGTATTCGGTAGTGAGCCTGAATCGCTGGTGA TGATGGCTATCGCATTCGTCGCATTGATTGCCAATACCAGTTGTCTGCTGCTCATATCCAAACATCGGGAAGGCGGGGCG CACATGAAGGCAAGCTGGATATTCTCGGCCAACGACGTGGTGATCAACCTGGGGGTCATCACCGCCGGCGCCCTGGTCGC GTGGACCGGGTCCAATTATCCGGATCTGATTATCGGCACCATATCGGGAGTCATTGTACTTAACGGGGCCAGGCGTATTC TGGCGTTGAAGGGTTAA Protein sequence : MSKSCGGACGGDATSAADTDIQASSEAPGRWVSVYAVPKMDCPSEERMIRLALNGFEEIRALSFDLSNRRLKVVHDGEVE PVTSKLKTLGLGASLQETVAANPETIKAAEFSAASAKQESGTLRWLLGINALLFVVEMTAGLIAQSTGLIGESLDNFADA AVYGLALYAVGHSVKMQVRAAHLAGVLQLILAVGVLVEVVRRFVFGSEPESLVMMAIAFVALIANTSCLLLISKHREGGA HMKASWIFSANDVVINLGVITAGALVAWTGSNYPDLIIGTISGVIVLNGARRILALKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | AGK36654.1 | Co/Zn/Cd efflux system component | Not tested | AbaR26 | Protein | 5e-119 | 95 |
| ACICU_00235 | YP_001844894.1 | heavy metal detoxification protein | Not tested | AbaR20 | Protein | 6e-119 | 95 |
| cadA | ACN81030.1 | Co/Zn/Cd efflux system component | Not tested | AbaR5 | Protein | 6e-119 | 95 |
| cadA | ACS32042.1 | Co/Zn/Cd efflux system component | Not tested | AbaR5 | Protein | 6e-119 | 95 |
| 1_43 | CAJ77022.1 | Heavy metal detoxification protein | Not tested | AbaR1 | Protein | 5e-119 | 95 |
| 1_376 | CAJ77095.1 | Heavy metal detoxification protein | Not tested | AbaR1 | Protein | 5e-119 | 95 |
| cadA | ADZ05770.1 | Co/Zn/Cd efflux system component | Not tested | AbaR11 | Protein | 5e-119 | 95 |
