Gene Information

Name : ABO_1368 (ABO_1368)
Accession : YP_693088.1
Strain : Alcanivorax borkumensis SK2
Genome accession: NC_008260
Putative virulence/resistance : Resistance
Product : cation efflux system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1230
EC number : -
Position : 1556832 - 1557728 bp
Length : 897 bp
Strand : +
Note : (Cation efflux system permease, ),identified by sequence similarity; InterPro: Heavy-metal-associated domain; High confidence in function and specificity

DNA sequence :
ATGAGCAAATCCTGTGGTGGCGCCTGTGGCGGTGATGCAACGTCCGCAGCGGATACCGATATACAGGCCTCCTCCGAGGC
GCCAGGGAGATGGGTCAGTGTTTATGCCGTGCCGAAGATGGACTGTCCATCAGAAGAACGAATGATTCGCCTAGCCCTGA
ACGGCTTTGAGGAGATTCGGGCGCTGTCCTTCGACTTGTCGAACCGCCGGCTGAAGGTCGTGCATGACGGCGAGGTCGAG
CCCGTCACCTCGAAACTGAAGACCTTGGGGCTAGGCGCCTCGCTTCAGGAAACCGTCGCTGCAAATCCGGAGACCATCAA
GGCCGCCGAGTTTTCGGCAGCTTCTGCTAAGCAAGAATCCGGGACCCTGCGCTGGTTGCTCGGCATCAATGCACTTCTGT
TCGTGGTGGAAATGACTGCCGGTCTGATCGCCCAGTCCACCGGCCTGATTGGAGAATCCCTGGACAATTTTGCCGATGCG
GCGGTGTACGGGCTTGCCCTTTATGCGGTTGGACATAGCGTGAAAATGCAGGTACGTGCCGCGCATCTTGCTGGTGTACT
GCAACTGATCTTGGCTGTGGGCGTGCTCGTAGAGGTGGTGAGACGCTTTGTATTCGGTAGTGAGCCTGAATCGCTGGTGA
TGATGGCTATCGCATTCGTCGCATTGATTGCCAATACCAGTTGTCTGCTGCTCATATCCAAACATCGGGAAGGCGGGGCG
CACATGAAGGCAAGCTGGATATTCTCGGCCAACGACGTGGTGATCAACCTGGGGGTCATCACCGCCGGCGCCCTGGTCGC
GTGGACCGGGTCCAATTATCCGGATCTGATTATCGGCACCATATCGGGAGTCATTGTACTTAACGGGGCCAGGCGTATTC
TGGCGTTGAAGGGTTAA

Protein sequence :
MSKSCGGACGGDATSAADTDIQASSEAPGRWVSVYAVPKMDCPSEERMIRLALNGFEEIRALSFDLSNRRLKVVHDGEVE
PVTSKLKTLGLGASLQETVAANPETIKAAEFSAASAKQESGTLRWLLGINALLFVVEMTAGLIAQSTGLIGESLDNFADA
AVYGLALYAVGHSVKMQVRAAHLAGVLQLILAVGVLVEVVRRFVFGSEPESLVMMAIAFVALIANTSCLLLISKHREGGA
HMKASWIFSANDVVINLGVITAGALVAWTGSNYPDLIIGTISGVIVLNGARRILALKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
1_376 CAJ77095.1 Heavy metal detoxification protein Not tested AbaR1 Protein 5e-119 95
cadA ADZ05770.1 Co/Zn/Cd efflux system component Not tested AbaR11 Protein 5e-119 95
cadA AGK36654.1 Co/Zn/Cd efflux system component Not tested AbaR26 Protein 5e-119 95
ACICU_00235 YP_001844894.1 heavy metal detoxification protein Not tested AbaR20 Protein 6e-119 95
cadA ACN81030.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 6e-119 95
cadA ACS32042.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 6e-119 95
1_43 CAJ77022.1 Heavy metal detoxification protein Not tested AbaR1 Protein 5e-119 95