Gene Information

Name : ABO_1367 (ABO_1367)
Accession : YP_693087.1
Strain : Alcanivorax borkumensis SK2
Genome accession: NC_008260
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1556329 - 1556751 bp
Length : 423 bp
Strand : -
Note : transcriptional regulator MerR family identified by match to PFAM protein family HMMPF00376 InterPro: Bacterial regulatory proteins MerR family; Family membership

DNA sequence : 
TTGGGGAGGAGGCTGATGCGCATTGGTCAGTTGGCGCAGTTGGTAGGGGTCGAAACACAGACGATCCGCTTCTATGAACA
GCAGGGCTTGTTGCCGCCGCCTGATCGGCAGGACAACGGTTACCGTGTCTATACCGAGAAGCATGGTGAGGGGCTGGCCT
TCATCCGTCGCTGCAGAATCCTGGGCCTGTCACTGGCTGAGATTCACGAACTACAGAGCTATCAGGACGACCCTCATCAG
CCTTGTACCGCCGTCAACGCCTTGCTCGATGATCACATCTCTCATGTGCGGTCGCAGATAACCGCTCTGCAAGCGCTTGA
GAAACAACTCGTTTCACTGAGAGCGAGTTGCAACGATGACCGGGAAGTTGAGGCGTGTGGGGTTCTTGCTGGAATTAGCG
AAGGAAACATGCACCAGCAGTAG

Protein sequence : 
MGRRLMRIGQLAQLVGVETQTIRFYEQQGLLPPPDRQDNGYRVYTEKHGEGLAFIRRCRILGLSLAEIHELQSYQDDPHQ
PCTAVNALLDDHISHVRSQITALQALEKQLVSLRASCNDDREVEACGVLAGISEGNMHQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 3e-54 91
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 4e-54 90
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 6e-54 90
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 5e-55 89
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 5e-55 89
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 8e-55 89
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 1e-54 88
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 1e-29 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABO_1367 YP_693087.1 MerR family transcriptional regulator BAC0301 Protein 6e-24 47
ABO_1367 YP_693087.1 MerR family transcriptional regulator BAC0058 Protein 2e-28 47