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Name : gspE (ABO_1312) Accession : YP_693032.1 Strain : Alcanivorax borkumensis SK2 Genome accession: NC_008260 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1489259 - 1490761 bp Length : 1503 bp Strand : + Note : Involved in a general secretion pathway (GSP) for the export of proteins. Belongs to the GSP E family,identified by sequence similarity. InterPro: Bacterial type II secretion system protein E; Family membership DNA sequence : ATGGCTGAGCACATGGAGTCGCCTGAGAACATAGAGCTTTCTTCATCGTTGTTGCCCTATGGTTTCGCGCGGCGTTTCGG TGTTCTGTTGCGTGAGCGCGATGGGCAGAAAGAGTTGTGTCACCGGCAGGATGTTTCACTGGCCGCGCTAGGTGAGGTGC AACGTCATATCGGCCGCCTGCCGCGCCTAGTACCCATGGACGACACGGCTTTTAGCGCCGCCATGGCAATCACCTATGAA CAGCAGCGCGGCGCGGCAGCAGAAGCCGCCGATGATCTGGAAGGACTTGATCTGGCAAGCCTAGCAGACTCACTGCCGGA AACGTCGGATTTGCTTGAGCAGGAAGACGATGCTCCGATCATTCGGCTGATCAATGCCTTGTTACAGGAAGCCATCCGTG AAGATGCCTCCGATATCCACATCGAAACCTTCGAACGACGGCTAGTAGTTCGTATGCGAGTCGATGGTGTCCTTCGTGAA GTGCTTACCCCGAAAAGGGAACTGGCGCCGTTGTTAGTCTCGCGAATCAAGGTAATGGCGCGAATGGATATCGCTGAAAA GCGGATACCTCAGGATGGTCGAATCTCCTTGCGCATTGGTGGGCGCGATGTGGATGTGCGGGTATCGACTATGCCCTCCA GTAATGGTGAGCGGGTGGTGCTACGCTTGTTGGACAAGCAAGCGGGGCGTTTACAGGTATCGCATTTGGGCATGGGCGAA ACCTGTGACGCTCATATGCGCGAGCTAATCCATAAACCCCATGGCATTATTCTGGTGACCGGCCCGACAGGGTCCGGTAA AACCACAACGCTTTATGCTTCCCTAACCGAATTGAATGACAGTACCCGCAATATTCTTACGGTAGAAGATCCCATCGAAT ACCAGCTAGAAGGGATCGGCCAGACTCAAGTCAACACTAAAGTCGACATGACATTTGCCCGCGGACTGCGTGCCATCCTT CGCCAAGATCCAGATGTGGTGATGGTGGGGGAGATCCGGGATCTGGAAACCGCTGAAATTGCAGTGCAAGCCTCCCTGAC CGGCCACCTTGTACTGTCTACTTTGCATACCAATACAGCAGTGGGGGCGGTGACCCGCTTGCAGGACATGGGCATTGAAC CTTTCTTGCTCTCTAGCTCCCTGCTGGGTTCCTTGGCTCAGCGGCTGGTGCGTGTGCTATGCGATGACTGTAAAACCCCG TACCAGGCTAGCGCTAGTGAGCTGGAAATGATGGGGTTGGCGGCTACGGAGAGCCGTACGCTGTATCACCCCAATGGTTG TGAATCCTGTAACCATCAGGGTTACCGGGGCCGTACCGGGATCTATGAACTGGTACTGGTGGATGACACGCTACGCCAGT TGATCCACGATCGCGCCGGCGAGCTAGAACTTAACCGCCATGCTCGGACACTAACTAGCGGTATCCGCGAAGATGGTTGG CGAAAAGTGCTCGGCGGACACACCAGTGTAGAAGAGGTCCTGCGGGTAACCCGCGAGGACTAA Protein sequence : MAEHMESPENIELSSSLLPYGFARRFGVLLRERDGQKELCHRQDVSLAALGEVQRHIGRLPRLVPMDDTAFSAAMAITYE QQRGAAAEAADDLEGLDLASLADSLPETSDLLEQEDDAPIIRLINALLQEAIREDASDIHIETFERRLVVRMRVDGVLRE VLTPKRELAPLLVSRIKVMARMDIAEKRIPQDGRISLRIGGRDVDVRVSTMPSSNGERVVLRLLDKQAGRLQVSHLGMGE TCDAHMRELIHKPHGIILVTGPTGSGKTTTLYASLTELNDSTRNILTVEDPIEYQLEGIGQTQVNTKVDMTFARGLRAIL RQDPDVVMVGEIRDLETAEIAVQASLTGHLVLSTLHTNTAVGAVTRLQDMGIEPFLLSSSLLGSLAQRLVRVLCDDCKTP YQASASELEMMGLAATESRTLYHPNGCESCNHQGYRGRTGIYELVLVDDTLRQLIHDRAGELELNRHARTLTSGIREDGW RKVLGGHTSVEEVLRVTRED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-137 | 64 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-137 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_693032.1 | general secretion pathway protein E | VFG0182 | Protein | 6e-147 | 70 |
| gspE | YP_693032.1 | general secretion pathway protein E | VFG2048 | Protein | 3e-136 | 63 |
| gspE | YP_693032.1 | general secretion pathway protein E | VFG1876 | Protein | 1e-131 | 60 |
| gspE | YP_693032.1 | general secretion pathway protein E | VFG2426 | Protein | 1e-76 | 49 |
