Gene Information

Name : ABO_1183 (ABO_1183)
Accession : YP_692903.1
Strain : Alcanivorax borkumensis SK2
Genome accession: NC_008260
Putative virulence/resistance : Unknown
Product : aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : 2.6.1.2
Position : 1343347 - 1344576 bp
Length : 1230 bp
Strand : -
Note : broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor

DNA sequence :
ATGACAATCGATCAATATCACGTCAGCAAATCCGACAAACTCAACGGCGTATGTTACGACATCCGCGGCCCCGTGCTGCG
TGAAGCGCACCGGCTGGAAGATGAAGGCCACCGGGTCATCAAACTGAACATCGGTAACCCGGCGCCTTTTGGCTTTGAAG
CGCCGGAAGAACTGCTTCAGGACGTGATCGCCAATCTCCCGGAATCAACTGGGTATTGCCATTCCAAAGGCCTATTCCCT
GCTCGCAAAGCGGTAATGCAGTACACCCAAACCAAGGGCATTGAAGGCGTCACCGTGGATGACGTGATTATTGGCAACGG
GGTGTCCGAGCTGATCGTCATGGCCATGCAGGCCCTACTCAACAGTGGCGATGAAGTACTATTGCCCGCCCCAGATTACC
CGCTGTGGACCGCTTCGGTGCGATTATCCGGTGGCACCCCAGTGCATTATCTGTGCGATGAACAGCAAGATTGGCAGCCC
TCTTTGGAAGACATTCGCGCTAAGGTCAATAAGAACACCAAAGCGCTGGTCATTATCAACCCGAACAACCCCACCGGGGC
CAATTACGAACCTGCCATGTTGCGCGAACTATTGCAGATAGCCCGCGAGAACAACTTGATCGTATTCGCCGATGAAATCT
ACGACAAGATTCTCTACGACGGCGAAGAACACACCTCCATCGCCTCCATGGCTGATGATTTGCTATTCATCACTTTTAAC
GGCCTATCCAAAAACTACCGCGCCGCCGGTTTCCGCGCGGGTTGGATGGTTATTTCCGGGGCCAAACACCGGGCGGAAAG
CTATATCGAAGGCCTAGACATGCTCGCCAGCATGCGGCTGTGCGCCAATGTGCCCAGCCAACATGCCATCCAGACGGCCC
TGGGCGGCTACCAGAGCATTGATGATTTAGTTCTGCCCACCGGGCGTCTGGGGCGCCAGCGTGACCTAGCCTGGGAAATG
CTCGACTCGATTCCAGGGGTAAGCTGCGTTAAACCAAAATCTGCCCTCTACCTCTTTCCGAAGCTGGACCCTAAGGTCTT
TCCCTTTGAAGATGACGAAGCCTTCGCACTGGACCTATTGCGCGAAGAGAAAGTGCTGATCGTCCAGGGCACCGCCTTTA
ACTGGCCGGATCCGGATCACTTCCGCGTAGTATTCCTGCCCCGCCCGGATGACCTGGAAGATTCCATCGGCCGCATTGCG
CGCTACCTGGATCGGGCACGAAAAAAATAA

Protein sequence :
MTIDQYHVSKSDKLNGVCYDIRGPVLREAHRLEDEGHRVIKLNIGNPAPFGFEAPEELLQDVIANLPESTGYCHSKGLFP
ARKAVMQYTQTKGIEGVTVDDVIIGNGVSELIVMAMQALLNSGDEVLLPAPDYPLWTASVRLSGGTPVHYLCDEQQDWQP
SLEDIRAKVNKNTKALVIINPNNPTGANYEPAMLRELLQIARENNLIVFADEIYDKILYDGEEHTSIASMADDLLFITFN
GLSKNYRAAGFRAGWMVISGAKHRAESYIEGLDMLASMRLCANVPSQHAIQTALGGYQSIDDLVLPTGRLGRQRDLAWEM
LDSIPGVSCVKPKSALYLFPKLDPKVFPFEDDEAFALDLLREEKVLIVQGTAFNWPDPDHFRVVFLPRPDDLEDSIGRIA
RYLDRARKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-122 61
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-122 61
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-122 61
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 2e-122 61