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Name : ssuB (SFV_0935) Accession : YP_688462.1 Strain : Shigella flexneri 8401 Genome accession: NC_008258 Putative virulence/resistance : Resistance Product : aliphatic sulfonate ABC transporter ATP-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : - Position : 985605 - 986372 bp Length : 768 bp Strand : - Note : part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease DNA sequence : ATGAATACTGCTCGTCTGAACCAGGGCACACCATTGTTGCTCAATGCAGTAAGCAAACATTACGCGGAAAATATCGTCCT GAACCAACTGGATTTACATATTCCGGCAGGTCAGTTTGTGGCGGTGGTGGGCCGCAGCGGTGGTGGTAAAAGTACCCTGC TGCACCTGCTGGCCGGTCTGGAAACGCCAACCGCAGGCGATGTGTTAGCGGGCACCACACCGCTGGCTGAAATTCAGGAT GATACGCGAATGATGTTTCAGGATGCGCGTCTGCTGCCGTGGAAATCGGTGATTGATAACGTTGGGTTAGGCCTTAAAGG TCAGTGGCGCGATGCCGCGCGTCGGGCGTTGGCTGCGGTAGGACTGGAGAATCGCGCCGGGGAATGGCCTGCCGCACTTT CTGGCGGGCAGAAACAGCGTGTGGCGCTGGCAAGAGCGTTGATTCATCGACCGGGTTTATTGTTGCTTGATGAACCGCTC GGGGCACTGGACGCCTTAACGCGACTCGAGATGCAGGATTTGATTGTGTCACTTTGGCAGCAGCACGGCTTTACCGTACT GTTGGTGACGCATGATGTGAGCGAAGCGGTAGCAATGGCTGACCGGGTGTTGTTAATTGAAGAGGGAAAAATTAGTCTGG ATTTGACAGTGGATATCCCCCGTCCGCGTCGATTAGGGTCGGTGCGATTAGCGGAGCTGGAAGCGGAAGTATTGCAACGG GTAATGCGGCGTGGGCATTCTGAACAACTGATTCGGCGTCATGGTTAA Protein sequence : MNTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLHLLAGLETPTAGDVLAGTTPLAEIQD DTRMMFQDARLLPWKSVIDNVGLGLKGQWRDAARRALAAVGLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPL GALDALTRLEMQDLIVSLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKISLDLTVDIPRPRRLGSVRLAELEAEVLQR VMRRGHSEQLIRRHG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 4e-32 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ssuB | YP_688462.1 | aliphatic sulfonate ABC transporter ATP-binding protein | NC_008702.1.4606598. | Protein | 7e-15 | 41 |
