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Name : ybdM (SFV_0550) Accession : YP_688112.1 Strain : Shigella flexneri 8401 Genome accession: NC_008258 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : K : Transcription COG ID : COG1475 EC number : - Position : 581473 - 581964 bp Length : 492 bp Strand : - Note : Code: K; COG: COG1475 DNA sequence : GTGGATTGCGTTCTGTGGGTTAAAAACAGCCAACTTATGCCTAATGATTACAACCCAAACAACGTGGCACCACCCGAAAA AAAACTGCTGCAAAAATCCATTGAAATAGATGGTTTTACCCAACCCATTGTGGTCACACATACGGATAAAAATGCCATGG AAATCGTGGATGGTTTTCACCGCCATGAAATTGGTAAAGGCTCATCATCATTAAAATTACGCTTAAAAGGTTATTTGCCG GTGACCTGTCTGGAAGGTACGCGTAATCAACGCATCGCCGCGACTATTCGTCATAATCGCGCTCGTGGACGCCATCAAAT CACCGCCATGTCGGAAATCGTCCGTGAACTTAGCCAGTTGGGATGGGATGATAATAAAATTGGCAAAGAGCTGGGAATGG ACAGCGACGAAGTGCTGCGACTGAAGCAAATTAACGGCCTGCAAGAGTTGTTTGCCGACCGTCAATATTCCCGCGCCTGG ACGGTTAAATAG Protein sequence : MDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDKNAMEIVDGFHRHEIGKGSSSLKLRLKGYLP VTCLEGTRNQRIAATIRHNRARGRHQITAMSEIVRELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAW TVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4584 | NP_458668.1 | conserved hypothetical protein | Not tested | SPI-7 | Protein | 5e-46 | 61 |
| Z1644 | AAQ19140.1 | putative ParB-like nuclease | Not tested | PAI I CL3 | Protein | 9e-48 | 61 |
| ibrB | ADD91736.1 | predicted transcriptional regulator IbrB | Not tested | PAI-I AL862 | Protein | 9e-48 | 61 |
| Z1204 | NP_286739.1 | hypothetical protein | Not tested | TAI | Protein | 2e-47 | 61 |
| Z1644 | NP_287147.1 | hypothetical protein | Not tested | TAI | Protein | 2e-47 | 61 |
| z1204 | CAD33764.1 | Z1204 protein | Not tested | PAI I 536 | Protein | 7e-47 | 61 |
| t4278 | NP_807876.2 | hypothetical protein | Not tested | SPI-7 | Protein | 4e-46 | 61 |
| ORF_30 | AAZ04440.1 | conserved hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 5e-35 | 60 |
| APECO1_3503 | YP_854305.1 | hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 7e-35 | 60 |
| c5208 | NP_757056.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 7e-35 | 60 |
| M5005_Spy_0164 | YP_281528.1 | parB-like nuclease | Not tested | Not named | Protein | 1e-29 | 53 |
| ef0120 | AAM75321.1 | EF0120 | Not tested | Not named | Protein | 4e-31 | 52 |
| EF0607 | NP_814365.1 | ParB-like nuclease domain-containing protein | Not tested | Not named | Protein | 6e-31 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ybdM | YP_688112.1 | hypothetical protein | VFG1505 | Protein | 3e-47 | 61 |
