Gene Information

Name : SFV_0526 (SFV_0526)
Accession : YP_688090.1
Strain : Shigella flexneri 8401
Genome accession: NC_008258
Putative virulence/resistance : Unknown
Product : IS600 ORF1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 553403 - 553624 bp
Length : 222 bp
Strand : -
Note : Code: L; COG: COG2963

DNA sequence :
ATGAGCAGAAAAACCCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCCCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTGA

Protein sequence :
MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 7e-28 100
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 7e-28 100
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-27 99
unnamed AAF09021.1 unknown Not tested SHI-O Protein 2e-27 99
unnamed AAF09029.1 unknown Not tested SHI-O Protein 2e-27 99
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 1e-27 99
EXB21 ABD94708.1 putative transposase Not tested ExoU island B Protein 1e-06 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFV_0526 YP_688090.1 IS600 ORF1 VFG1707 Protein 5e-28 99