Gene Information

Name : hpcR (SFV_4385)
Accession : YP_691663.1
Strain : Shigella flexneri 8401
Genome accession: NC_008258
Putative virulence/resistance : Resistance
Product : regulator of the 4HPA-hydroxylase operon
Function : -
COG functional category : K : Transcription
COG ID : COG1846
EC number : -
Position : 4524455 - 4524901 bp
Length : 447 bp
Strand : +
Note : Code: K; COG: COG1846

DNA sequence :
ATGCACGACTCACTAACCATTGCGTTGCTCCAGGCGCGAGAAGCGGCGATGAGTTATTTTCGCCCAATCGTTAAACGGCA
TAATTTGACTGAGCAACAGTGGCGCATCGTGCGTATTCTGGCGGAAAGCCCATCAATGGATTTTCACGATCTGGCGTATC
GCGCCTGCATTTTGCGCCCAAGCCTGACCGGGATCCTCACGCGGATGGAACGCGACGGTTTAGTGTTGCGATTAAAGCCG
ATCAATGATCAGCGGAAGCTCTATATCTCGCTGACCAAAGAGGGGCAGGCGCTGTATAACCGCGCTCAGACACAGATTGA
AGAAGCCTATCGGCAGATTGAAGCTCAGTTTACTGCCGAGAAAATGCAACAGTTAACCCATCTGTTAGAGGAATTTATTG
CTCTGGGCAATTCCCGACAAGAAGACATCCCGGGCGATAATGAATAA

Protein sequence :
MHDSLTIALLQAREAAMSYFRPIVKRHNLTEQQWRIVRILAESPSMDFHDLAYRACILRPSLTGILTRMERDGLVLRLKP
INDQRKLYISLTKEGQALYNRAQTQIEEAYRQIEAQFTAEKMQQLTHLLEEFIALGNSRQEDIPGDNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpcR AAO17176.1 HpcR Not tested tcd island Protein 7e-48 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hpcR YP_691663.1 regulator of the 4HPA-hydroxylase operon BAC0505 Protein 6e-34 58