Gene Information

Name : sgaU (SFV_4353)
Accession : YP_691632.1
Strain : Shigella flexneri 8401
Genome accession: NC_008258
Putative virulence/resistance : Unknown
Product : L-xylulose 5-phosphate 3-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3623
EC number : -
Position : 4494201 - 4495055 bp
Length : 855 bp
Strand : +
Note : UlaE; catalyzes the epimerization of L-ribulose-5-phosphate into L-xylulose-5-phosphate; part of the anaerobic L-ascorbate degradation pathway

DNA sequence :
ATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCGACT
GGCAAAAACGTTGGGCTTCGATTTTGTCGAGATGTCGGTAGATGAAACTAACGAGCGCCTGTCGCGCCTCGACTGGAGCC
GCGTACAGCGTCTGGCGCTGGTGAATGCTATTGTTGAAACCGGCGTGCGTGTGCCGTCCATGTGCCTTTCTGCCCATCGT
CGTTTCCCGTTGGTCAGCGAAGATGACGCGGTGCGGGCGCAGGGGCTGGAGATTATGCGTAAAGCCATCCAGTTCGCCCA
GGACGTTGGCATTCGCGTGATCCAGCTGTCGGGCTATGACGTTTACTATCAGGAAGCCAATAACGAAACGCGTCGTCGTT
TCCGTGACGGCCTGAAAGAGAGCGTTGAGATGGCGAGCCGCGCGCAGGTGACGCTGGCGATGGAGATCATGGATTATCCG
TTGATGAACTCCATCAGCAAGGCGCTGGGTTACGCGCACTATCTCAACAACCCGTGGTTCCAGCTCTACCCGGATATCGG
CAACCTGTCGGCGTGGGACAACGATGTGCAGATGGAGTTGCAGGCCGGAATCGGGCATATCGTCGCGGTGCATGTGAAAG
ACACCAAACCGGGCGTCTTCAAAAACGTGCCATTTGGCGAAGGTGTGGTGGATTTCGAACGTTGCTTCGAAACGCTCAAA
CAGAGTGGCTATTGCGGGCCGTACCTGATTGAGATGTGGAGCGAAACGGCGGAAGACCCGGCGGCAGAAGTGGTGAAAGC
GTGTGATTGGGTGAAAGCGCGCATGGCCAAAGCAGGCATGGTGGAGGCGGCATAA

Protein sequence :
MLSKQIPLGIYEKALPAGECWLERLRLAKTLGFDFVEMSVDETNERLSRLDWSRVQRLALVNAIVETGVRVPSMCLSAHR
RFPLVSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLSGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYP
LMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLK
QSGYCGPYLIEMWSETAEDPAAEVVKACDWVKARMAKAGMVEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 2e-60 50