Gene Information

Name : shiB (SFV_3868)
Accession : YP_691183.1
Strain : Shigella flexneri 8401
Genome accession: NC_008258
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3967973 - 3968434 bp
Length : 462 bp
Strand : -
Note : -

DNA sequence : 
ATGGATGAAAATGCTTTAAGGTTTGCCTCATACTGGCGCAACTCGCTTGCAGATGCTGAGTCAGGAAAGGGCTGTTTTGA
ACAGAAAGACGCCCAAAATTTCACTCACTGGCATGGGATAGCGGCGGGACGTCTTGACGAAGCGATTGTCAATAAATTTT
TTAAGGGAGAAAAAGACGATGTCGAAACTGTCAATGTCATCTTACGCCCAAAAGTTTATTTCCGGTTACTGCAGCATGGT
AAGGACCGTTCCGCAGGCACGCCTGATATTGTTACACCGATAGTGACGCCAGCCTTGCTAAGCCGTGAGGGTTTTTTATA
TCCGACGCCAGCGACCTCCATTCCCAGAGACCTGCTTGAACCTTTGCCAAAAGGAGCATTTTCGATTGGTGAGATTGGGC
AGTATGACAAATACAAGACGACCCATACTGATCCTACCCACGTAATGTGGACACGGCCCTAA

Protein sequence : 
MDENALRFASYWRNSLADAESGKGCFEQKDAQNFTHWHGIAAGRLDEAIVNKFFKGEKDDVETVNVILRPKVYFRLLQHG
KDRSAGTPDIVTPIVTPALLSREGFLYPTPATSIPRDLLEPLPKGAFSIGEIGQYDKYKTTHTDPTHVMWTRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
shiB AAD44732.1 ShiB Virulence SHI-2 Protein 1e-69 100
shiB NP_839236.1 hypothetical protein Virulence SHI-2 Protein 6e-69 99
shiB NP_709439.1 hypothetical protein Virulence SHI-2 Protein 6e-69 99
shiB AAK71629.1 ShiB Not tested SHI-3 Protein 5e-61 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
shiB YP_691183.1 hypothetical protein VFG0600 Protein 2e-69 99
shiB YP_691183.1 hypothetical protein VFG1077 Protein 2e-61 95