Gene Information

Name : SFV_3867 (SFV_3867)
Accession : YP_691182.1
Strain : Shigella flexneri 8401
Genome accession: NC_008258
Putative virulence/resistance : Unknown
Product : IS3 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3967485 - 3967976 bp
Length : 492 bp
Strand : +
Note : -

DNA sequence :
GTGGCCCGAAACCAGAAGTGGGCGGGTGACATCACGTACTTGCGTACCGATGAGGGCTGGTTGTATCTCGCAGTAGTCAT
CGACCTGTGGTCACGCGCCGTCATTGGCTGGTCGATGTCACCGCGAATGACAGCACAACTGGCCTGTGATGCACTGCAAA
TGGCGTTGTGGCGGAGAAGACGCCCGGAAAGCGTCATTGTTCATACGGACCGTGGTGGTCAATACTGTTCAGGGGATTAT
CAGGCAATGCTGAAGCGACACAACCTGCGTGGCAGTATGAGTGCGAAAGGCTACTGTTATGACAATGCCTGTGTGGAAAG
CTTCTTTCATTCGCTGAAGGTGGAATGTATCCACGGGGAACGCTTTAGCAGCCGGGAAATAATGCGGGCAACGGTGTTTA
ATTATATCGAGTGTGATTACAATCGCTGGCGTCGTCACAGTGCCTGTGGCGGTCTCAGCCCGGAACAATTTGAAAACCAT
AATCTCGCTTAG

Protein sequence :
MARNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRRRPESVIVHTDRGGQYCSGDY
QAMLKRHNLRGSMSAKGYCYDNACVESFFHSLKVECIHGERFSSREIMRATVFNYIECDYNRWRRHSACGGLSPEQFENH
NLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43898.1 putative transposase Not tested LEE Protein 2e-22 42
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 2e-22 42
unnamed AAC31485.1 L0006 Not tested LEE Protein 4e-23 41
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 6e-23 41
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 4e-23 41
Z5089 NP_290241.1 transposase Not tested LEE Protein 6e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFV_3867 YP_691182.1 IS3 ORF2 VFG0785 Protein 2e-23 41