|
Name : SFV_3865 (SFV_3865) Accession : YP_691180.1 Strain : Shigella flexneri 8401 Genome accession: NC_008258 Putative virulence/resistance : Unknown Product : IS3 ORF1 Function : - COG functional category : - COG ID : - EC number : - Position : 3966825 - 3967124 bp Length : 300 bp Strand : + Note : Code: L; COG: COG2963 DNA sequence : ATGACAAAACCAGTATCAATCAGCAAGAAGCCCCGTAAACAACATACGCCTGAATTTCGTAACGAAGCCCTGAAACTCGC TGAACGCATCGGTGTGGCCGCCGCAGCCCGTGAACTCAGCCTGTATGAATCTCAGCTTTATGCCTGGCGCAGTAAACAGC AGCAACAAATGAGTTCGTCAGAGCGCGAAAGCGAACTGGCCGCTGAAAATGTCCGCCTTAAACGACAACTGGCGGAGCAG GCTGAGGAACTGTCCATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA Protein sequence : MTKPVSISKKPRKQHTPEFRNEALKLAERIGVAAAARELSLYESQLYAWRSKQQQQMSSSERESELAAENVRLKRQLAEQ AEELSILQKAATYFAKRLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S4064 | NP_839234.1 | IS3 orfA | Not tested | SHI-2 | Protein | 3e-29 | 100 |
| SF3703 | NP_709442.1 | IS3 ORF1 | Not tested | SHI-2 | Protein | 3e-29 | 100 |
| unnamed | AAT48700.1 | transposon-related | Not tested | PAI II 4787 | Protein | 2e-28 | 98 |
| yis1_SHISO | CAD66178.1 | hypothetical protein of insertion element IS1 | Not tested | PAI III 536 | Protein | 2e-28 | 98 |
| unnamed | AAC28568.1 | YIS1_SHISO | Not tested | LEE | Protein | 4e-28 | 82 |
| unnamed | AAL57518.1 | transposase 2 | Not tested | LEE | Protein | 4e-28 | 82 |
| unnamed | AAL57580.1 | transposase 2 | Not tested | LEE | Protein | 4e-28 | 82 |
| ECO111_3733 | YP_003236069.1 | putative IS3 transposase InsE | Not tested | LEE | Protein | 6e-28 | 82 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SFV_3865 | YP_691180.1 | IS3 ORF1 | VFG0603 | Protein | 8e-30 | 100 |
| SFV_3865 | YP_691180.1 | IS3 ORF1 | VFG1632 | Protein | 7e-29 | 98 |
