|
Name : queA (SFV_0370) Accession : YP_687947.1 Strain : Shigella flexneri 8401 Genome accession: NC_008258 Putative virulence/resistance : Unknown Product : S-adenosylmethionine:tRNA ribosyltransferase-isomerase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0809 EC number : - Position : 388609 - 389679 bp Length : 1071 bp Strand : + Note : Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step DNA sequence : ATGCGCGTTACCGATTTCTCCTTTGAATTGCCCGAATCCCTGATTGCCCACTATCCCATGCCTGAACGCAGTAGCTGTCG TTTACTGTCGCTGGACGGGCCGACGGGCGCGCTGACGCACGGTACTTTCACCGATTTACTCGATAAGCTCAACCCCGGCG ATCTTCTGGTTTTTAATAATACCCGCGTGATCCCGGCGCGTCTGTTTGGGCGTAAAGCCAGCGGCGGCAAGATTGAAGTG CTGGTTGAGCGGATGCTCGACGACAAACGCATTCTTGCGCATATTCGCGCCTCGAAAGCGCCAAAACCTGGCGCAGAACT GTTGCTGGGCGATGACGAAAGTATCAACGCAACAATGACCGCGCGCCACGGCGCACTGTTTGAAGTCGAATTTAATGATG AACGCTCGGTACTGGATATCCTCAACAGCATCGGCCATATGCCGCTGCCGCCGTATATCGATCGTCCGGACGAAGACGCT GACCGCGAACTTTATCAAACCGTTTATAGCGAAAAACCGGGCGCGGTTGCAGCCCCGACCGCTGGTCTGCATTTTGACGA GCCTTTGCTGGAAAAATTACGCGCCAAAGGCGTGGAGATGGCGTTTGTGACGTTGCACGTTGGTGCGGGCACCTTCCAGC CGGTGCGCGTCGACACCATTGAAGATCACATCATGCACTCGGAATATGCTGAAGTACCGCAGGATGTGGTAGACGCGGTA CTGGCGGCGAAAGCGCGCGGTAACCGGGTGATTGCGGTTGGCACCACTTCAGTACGTTCGCTGGAAAGCGCGGCACAGGC GGCAAAAAACGATCTTATCGAACCGTTCTTTGACGATACCCAAATCTTTATCTATCCGGGCTTCCAGTACAAAGTGGTCG ATGCGCTGGTGACGAACTTCCACTTGCCAGAGTCGACGCTGATTATGCTGGTTTCGGCCTTTGCCGGTTATCAACACACC ATGAATGCCTATAAAGCGGCGGTAGAAGAGAAATATCGCTTTTTTAGTTACGGTGATGCGATGTTTATCACGTACAATCC GCAGGCAATTAATGAGCGCGTCGGGGAGTAA Protein sequence : MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEV LVERMLDDKRILAHIRASKAPKPGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDA DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAV LAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHT MNAYKAAVEEKYRFFSYGDAMFITYNPQAINERVGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| queA | AAF71483.1 | QueA | Not tested | Hrp PAI | Protein | 2e-119 | 71 |
| queA | AAF71490.1 | QueA | Not tested | Hrp PAI | Protein | 4e-113 | 71 |
| queA | AAT96070.1 | QueA | Not tested | T-PAI | Protein | 6e-114 | 71 |
| queA | AAT96042.1 | QueA | Not tested | T-PAI | Protein | 6e-114 | 71 |
| queA | AAT96122.1 | QueA | Not tested | T-PAI | Protein | 1e-118 | 70 |
| queA | AAT96182.1 | QueA | Not tested | T-PAI | Protein | 1e-112 | 70 |
| queA | AAT96106.1 | QueA | Not tested | T-PAI | Protein | 1e-113 | 70 |
