Gene Information

Name : SFV_3501 (SFV_3501)
Accession : YP_690845.1
Strain : Shigella flexneri 8401
Genome accession: NC_008258
Putative virulence/resistance : Unknown
Product : IS600 ORF1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 3571096 - 3571395 bp
Length : 300 bp
Strand : +
Note : Code: L; COG: COG2963

DNA sequence : 
ATGAGCAGAAAAACCCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCCCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCATGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAG
CGAGATATATTAAAAAAAGCAACAGCGTATTTTGCACAGGAGTCGCTGAAAAATAGGTAA

Protein sequence : 
MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTHGSRTVAELESEILQLRKALNEARLE
RDILKKATAYFAQESLKNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 2e-38 99
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 2e-38 99
unnamed AAF09021.1 unknown Not tested SHI-O Protein 6e-38 98
unnamed AAF09029.1 unknown Not tested SHI-O Protein 6e-38 98
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 4e-38 98
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-38 98
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 4e-33 97
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 4e-33 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFV_3501 YP_690845.1 IS600 ORF1 VFG1707 Protein 1e-38 98