Gene Information

Name : SFV_2766 (SFV_2766)
Accession : YP_690157.1
Strain : Shigella flexneri 8401
Genome accession: NC_008258
Putative virulence/resistance : Unknown
Product : IS600 ORF1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 2832603 - 2832884 bp
Length : 282 bp
Strand : -
Note : Code: L; COG: COG2963

DNA sequence : 
ATGAGCAGAAAAACCCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCTCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTTGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAG
CGAGATATATTAAAAAAAGCGGTAATGACTCCAACTTACTGA

Protein sequence : 
MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLE
RDILKKAVMTPTY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 6e-34 99
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 6e-34 99
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-33 98
unnamed AAF09021.1 unknown Not tested SHI-O Protein 1e-33 98
unnamed AAF09029.1 unknown Not tested SHI-O Protein 1e-33 98
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 8e-34 98
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 5e-34 94
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 5e-34 94
EXB21 ABD94708.1 putative transposase Not tested ExoU island B Protein 2e-08 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFV_2766 YP_690157.1 IS600 ORF1 VFG1707 Protein 3e-34 98