|
Name : pin (SFV_2610) Accession : YP_690012.1 Strain : Shigella flexneri 8401 Genome accession: NC_008258 Putative virulence/resistance : Unknown Product : DNA-invertase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 2680637 - 2681077 bp Length : 441 bp Strand : - Note : Code: L; COG: COG1961 DNA sequence : ATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAATACCGATCTACAACGTAATGCGTTGAACTGTGCAGGATG CGAGCTGATTTTTGAAGACAAGATAAGTGGTACAAAGTCCGAAAGACCGGGGCTGAAAAAACTGCTCAAGACATTATCGG CAGGCGACACACTGGTTGTCTGGAAGCTGGATCGGCTGGGGCGCAGTATGCGGCATCTTGTCGTGCTGGTGGAGGAGTTG CGCGAACGAGGCATCAACTTTCGTAGTCTGACTGATTCAATTGATACCAGCACACCAATGGGACGCTTTTTCTTCCATGT GATGGGTGCCCTGGCTGAAATGGAACGTGAACTGATTGTTGAACGAACAAAAGCAGGACTGGAAGCTGCTCGCGCACAGG GACGAATTGGCGGTCGCCGTCCCAAACTTTCACCAGAATAA Protein sequence : MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLKTLSAGDTLVVWKLDRLGRSMRHLVVLVEEL RERGINFRSLTDSIDTSTPMGRFFFHVMGALAEMERELIVERTKAGLEAARAQGRIGGRRPKLSPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| resX | ADZ05759.1 | invertase/resolvase | Not tested | AbaR10 | Protein | 2e-31 | 63 |
| resX | ADZ05809.1 | invertase/resolvase | Not tested | AbaR20 | Protein | 3e-32 | 63 |
| resX | AGK36651.1 | partial invertase/resolvase | Not tested | AbaR26 | Protein | 3e-32 | 63 |
| ACICU_00231 | YP_001844890.1 | site-specific recombinase, DNA invertase Pin protein | Not tested | AbaR20 | Protein | 4e-32 | 63 |
| resX | ACN81037.1 | partial invertase/resolvase | Not tested | AbaR5 | Protein | 4e-32 | 63 |
| 1_365 | CAJ77091.1 | Resolvase N-term | Not tested | AbaR1 | Protein | 3e-32 | 63 |
| resX | ADZ05753.1 | invertase/resolvase | Not tested | AbaR10 | Protein | 3e-32 | 63 |
| res | AGF35025.1 | resolvase | Not tested | SGI1 | Protein | 4e-32 | 63 |
| res | AGF35059.1 | resolvase | Not tested | SGI1 | Protein | 4e-32 | 63 |
| res | AGK06929.1 | resolvase | Not tested | SGI1 | Protein | 4e-32 | 63 |
| res | AGK06966.1 | resolvase | Not tested | SGI1 | Protein | 4e-32 | 63 |
| res | AGK07012.1 | resolvase | Not tested | SGI1 | Protein | 4e-32 | 63 |
| res | AGK07070.1 | resolvase | Not tested | SGI1 | Protein | 4e-32 | 63 |
| res | AAK02044.1 | resolvase | Not tested | SGI1 | Protein | 4e-32 | 63 |
| tnpR | ACD85600.1 | TnpR resolvase | Not tested | SGI2 | Protein | 4e-32 | 63 |
| res | AGF34985.1 | resolvase | Not tested | SGI1 | Protein | 4e-32 | 63 |
| res | YP_005124341.1 | DNA-invertase | Not tested | Not named | Protein | 5e-15 | 41 |
