|
Name : SFV_0218 (SFV_0218) Accession : YP_687799.1 Strain : Shigella flexneri 8401 Genome accession: NC_008258 Putative virulence/resistance : Unknown Product : IS911 ORF2 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 242965 - 243531 bp Length : 567 bp Strand : + Note : - DNA sequence : ATGAACATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGT GACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGG CCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGG GTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACA GAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAATGGATGC CGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAACGGACTATATCGTTGGATATTACAGTGCACTAAGA CCGCACGAATATAACGGTGGGTTACCCCCAAACGAATCGGAAAATCGATACTGGAAAAACTCTAACTCGGTGGCCAGTTT TTGTTGA Protein sequence : MNMLLSLTTLKGSSPVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPGG VMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALR PHEYNGGLPPNESENRYWKNSNSVASFC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 2e-75 | 91 |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 2e-75 | 91 |
| unnamed | CAI43898.1 | putative transposase | Not tested | LEE | Protein | 6e-53 | 64 |
| aec65 | AAW51748.1 | Aec65 | Not tested | AGI-3 | Protein | 6e-53 | 64 |
| ECs4537 | NP_312564.1 | hypothetical protein | Not tested | LEE | Protein | 2e-53 | 62 |
| unnamed | AAC31485.1 | L0006 | Not tested | LEE | Protein | 1e-53 | 62 |
| Z5089 | NP_290241.1 | transposase | Not tested | LEE | Protein | 2e-53 | 62 |
| unnamed | ACU09432.1 | IS911 transposase orfB | Not tested | LEE | Protein | 1e-53 | 62 |
| tnpA | AAD44733.1 | TnpA | Not tested | SHI-2 | Protein | 7e-22 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SFV_0218 | YP_687799.1 | IS911 ORF2 | VFG1484 | Protein | 7e-76 | 91 |
| SFV_0218 | YP_687799.1 | IS911 ORF2 | VFG0785 | Protein | 4e-54 | 62 |
