Gene Information

Name : lspA (SFV_0021)
Accession : YP_687614.1
Strain : Shigella flexneri 8401
Genome accession: NC_008258
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 24228 - 24722 bp
Length : 495 bp
Strand : +
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence : 
ATGAGTCAATCGATCTGTTCAACAGGGCTACGCTGGCTGTGGCTGGTGGTAATCGTGCTGATTATCGATCTGGGCAGCAA
ATACCTGATCCTCCAGAACTTTGCTCTGGGGGATACGGTCCCCCTGTTCCCGTCGCTTAATCTGCATGCTAGCGCGTACT
ATGGCGCGGCGTTTAGTTTCCTTGCCGATAGCGGCGGCTGGCAGCGTTGGTTCTTTGCCGGTATTGCGATTGGTATTAGC
GTGCTCCTGGCAGTGATGATGTATCGCTCGAAGGCCACGCAGAAGCTAAACAATATCGCTTACGCGCTGATTATTGGCGG
CGCGCTGGGCAACCTGTTCGACCGCCTGTGGCACGGCTTCGTTGTCGATATGATCGACTTCTACGTCGGCGACTGGCACT
TCGCCACCTTCAACCTTGCCGATACTGCCATTTGTGTCGGTGCGGCACTGATCGTGCTGGAAGGGTTTTTACCTTCCAAA
GCGAAAAAACAATAA

Protein sequence : 
MSQSICSTGLRWLWLVVIVLIIDLGSKYLILQNFALGDTVPLFPSLNLHASAYYGAAFSFLADSGGWQRWFFAGIAIGIS
VLLAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSK
AKKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 6e-19 45
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 7e-19 45
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-18 45
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-19 44
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 7e-20 44
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 7e-20 44
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 7e-20 44
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 1e-19 44