Gene Information

Name : SFV_1917 (SFV_1917)
Accession : YP_689372.1
Strain : Shigella flexneri 8401
Genome accession: NC_008258
Putative virulence/resistance : Unknown
Product : IS629 ORF2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1963805 - 1964158 bp
Length : 354 bp
Strand : -
Note : -

DNA sequence :
ATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGGCGGACCGCTATGCAGCGAACTGCATATTGCCCCGTCAACGTA
TTACCACTGTCAGCAACAGCGACATCATCCGGATAAACGCAGTGCCCGTGCGCAGCGCGATGACTGGCTGAAGAAAGAGA
TACAGCGCGTATACGATGAAAATCACAAGGTATACGGTGTAAAGTCTGGCGTCAGTTGTTACGGGAAGGTATCAGAGTGG
CCAGATGCACTGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTACGACCATC
AGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAA

Protein sequence :
MPLLDKLREQYGGGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVKSGVSCYGKVSEW
PDALWHVSWRLWDLPVFSGVKRSVRPSAGKPLPQATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF09024.1 unknown Not tested SHI-O Protein 8e-52 100
tnpD AAD44737.1 TnpD Not tested SHI-2 Protein 3e-51 99
unnamed AAT48692.1 transposase R14 Not tested PAI I 4787 Protein 1e-28 63
c3595 NP_755470.1 transposase Not tested PAI I CFT073 Protein 1e-28 63
r14 AAC61721.1 transposase R14 Not tested PAI I CFT073 Protein 2e-28 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFV_1917 YP_689372.1 IS629 ORF2 VFG1716 Protein 4e-29 63