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Name : pspF (SFV_1317) Accession : YP_688826.1 Strain : Shigella flexneri 8401 Genome accession: NC_008258 Putative virulence/resistance : Virulence Product : phage shock protein operon transcriptional activator Function : - COG functional category : K : Transcription COG ID : COG1221 EC number : - Position : 1375012 - 1375989 bp Length : 978 bp Strand : - Note : transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor DNA sequence : ATGGCCGAATACAAAGATAATTTACTTGGTGAGGCGAACAGCTTTCTCGAAGTGCTGGAACAGGTTTCGCATCTCGCACC GCTGGACAAACCGGTGCTCATCATCGGCGAACGCGGCACCGGTAAAGAGTTGATTGCCAGCCGCCTGCATTATCTCTCCT CCCGTTGGCAAGGGCCGTTTATTTCCCTTAACTGCGCGGCGTTAAATGAAAATCTGCTGGATTCCGAACTGTTTGGTCAC GAAGCGGGGGCGTTTACCGGTGCGCAAAAACGTCATCCTGGGAGATTTGAACGTGCCGACGGCGGTACGCTATTTCTTGA TGAACTCGCTACGGCACCGATGATGGTGCAGGAAAAATTATTGCGTGTGATTGAGTACGGTGAACTGGAGCGCGTTGGCG GTAGCCAGCCGTTGCAGGTGAATGTGCGGTTGGTATGCGCGACGAATGCCGATCTCCCGGCGATGGTCAATGAAGGTACT TTTCGCGCTGACCTGCTCGACCGGCTGGCTTTCGATGTAGTGCAACTGCCGCCCCTGCGCGAGCGCGAAAGCGACATTAT GCTGATGGCAGAACACTTTGCCATTCAGATGTGTCGGGAAATCAAGCTGCCTCTGTTCCCGGGGTTTACGGAGCGCTCCA GAGAAACATTGCTGAATTATCGTTGGCCGGGAAATATTCGTGAATTGAAAAACGTGGTGGAACGTTCAGTGTATCGCCAC GGCACCAGCGATTATCCGCTTGATGACATCATTATTGATCCCTTTAAACGGCGTCCACCTGAAGAAGCCATCGCCGTTTC AGAAAATACCTCGCTTCCGACGCTGCCGCTGGATTTACGCGAGTTTCAGATGCAGCAGGAAAAAGAGTTGCTGCAACTCA GTTTGCAACAGGGGAAATATAACCAGAAGCGCGCGGCTGAATTACTGGGGTTAACTTATCATCAGTTCCGCGCGTTGTTG AAAAAGCACCAGATTTAG Protein sequence : MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAALNENLLDSELFGH EAGAFTGAQKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGT FRADLLDRLAFDVVQLPPLRERESDIMLMAEHFAIQMCREIKLPLFPGFTERSRETLLNYRWPGNIRELKNVVERSVYRH GTSDYPLDDIIIDPFKRRPPEEAIAVSENTSLPTLPLDLREFQMQQEKELLQLSLQQGKYNQKRAAELLGLTYHQFRALL KKHQI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAT96161.1 | HrpS | Virulence | T-PAI | Protein | 3e-35 | 41 |
| hrpS | AAT96215.1 | HrpS | Virulence | T-PAI | Protein | 3e-35 | 41 |
