|
Name : aldH (SFV_1314) Accession : YP_688823.1 Strain : Shigella flexneri 8401 Genome accession: NC_008258 Putative virulence/resistance : Unknown Product : gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 1370820 - 1372307 bp Length : 1488 bp Strand : + Note : catalyzes the formation of gamma-glutamyl-gamma-aminobutyrate from Gamma-glutamyl-gamma-aminobutyraldehyde; involved in putrescine degradation DNA sequence : ATGAATTTTCATCATCTGGCTTACTGGCAGGATAAAGCGTTAAGTCTCGCCATTGAAAACCGCTTATTTATTAACGGTGA ATATACTGCTGCGGCGGAAAATGAAACCTTTGAAACCGTTGATCCGGTCACCCAGGCACCGCTGGCGAAAATTGCCCGCG GCAAGAGCGTCGATATCGACCGTGCGGTGAGCGCAGCACGCGGCGTATTTGAACGCGGCGACTGGTCACTCTCTTCTCCG GCTAAACGTAAAGCGGTACTGAATAAACTCGCCGATTTAATGGAAGCCCACGCCGAAGAGCTGGCACTGCTGGAAACTCT CGACACCGGCAAACCGATTCGTCACAGTCTGCGTGATGATATTCCCGGCGCGGCGCGCGCCATTCGCTGGTACGCCGAAG CGATCGACAAAGTGTATGGCGAAGTGGCGACCACCAGTAGCCATGAGCTGGCGATGATCGTGCGTGAACCGGTCGGCGTG ATTGCCGCCATCGTGCCGTGGAACTTCCCGCTGTTGCTGACTTGCTGGAAACTCGGCCCGGCGCTGGCGGCGGGAAACAG CGTGATTCTAAAACCGTCTGAAAAATCACCGCTCAGTGCGATTCGTCTCGCGGGGCTGGCGAAAGAAGCAGGCTTGCCGG ATGGTGTGTTGAACGTGGTGACGGGTTTTGGTCATGAAGCGGGGCAGGCGCTTTCGCGTCATAACGATATCGATGCCATC GCCTTTACCGGCTCCACGCGTACGGGTAAACAACTGCTGAAAGACGCGGGTGATAGCAACATGAAACGTGTCTGGCTGGA AGCGGGCGGCAAAAGCGCCAACATCGTTTTCGCCGATTGTCCGGATCTGCAAAAAGCGGCAAGCGCCACCGCCGCAGGCA TCTTCTACAACCAGGGCCAGGTGTGCATCGCCGGAACGCGTTTGTTACTGGAAGAGAGCATCGCCGATGAATTCTTAGCC CTGTTAAAACAGCAGGCGCAAAACTGGCAGCCGGGCCATCCACTTGATCCCGCAACCACCATGGGCACCTTAATCGACAG CGCTCACGCTGACTCGGTACACACCTTTATTCGTGAAGGCGAAGGCAAGGGGCAACTGCTGCTGGATGGTCGCAACGCCG GGCTGGCAGCGGCCATCGGCCCGACCATCTTCGTGGATGTGGACCCGAATGCGTCCTTAAGCCGCGAAGAGATTTTCGGT CCGGTGCTGGTGGTCACCCGTTTCACATCAGAAGATCAGGCGCTGCAGCTTGCCAACGACAGCCAGTACGGCCTTGGCGC GGCGGTATGGACGCGCGACCTCTCCCGCGCGCACCGCATGAGCCGACGCCTGAAAGCCGGTTCCGTCTTCGTCAATAACT ACAACGACGGCGATATGACCGTGCCGTTTGGCGGCTATAAGCAGAGCGGCAACGGTCGCGACAAATCCCTGCATGCCCTT GAAAAATTCACTGAACTGAAAACCATCTGGATAAGCCTGGAGGCCTGA Protein sequence : MNFHHLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSP AKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGV IAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAI AFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQKAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLA LLKQQAQNWQPGHPLDPATTMGTLIDSAHADSVHTFIREGEGKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFG PVLVVTRFTSEDQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHAL EKFTELKTIWISLEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 7e-109 | 52 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 1e-70 | 41 |
