Gene Information

Name : SFV_1073 (SFV_1073)
Accession : YP_688589.1
Strain : Shigella flexneri 8401
Genome accession: NC_008258
Putative virulence/resistance : Unknown
Product : IS629 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1118309 - 1118695 bp
Length : 387 bp
Strand : +
Note : -

DNA sequence :
ATGGAAACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCGACCGTCCGGCACGGTCCATCACAGTGA
TAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAG
GCGACTCGTATGACAACGCGATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGCTGGAAA
AACCGTGCAGAAATGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCA
CATCCCTCCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAACGATGATCTGGCAGCCTGA

Protein sequence :
METTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWK
NRAEMELATLTWVDWYNNRRLLERLGHIPPAEAEKAYYASIGNDDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r15 AAC61720.1 putative transposase R15 Not tested PAI I CFT073 Protein 6e-50 93
unnamed AAT48693.1 unknown Not tested PAI I 4787 Protein 5e-50 93
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 1e-49 93
CDCE8392_1980 YP_005134511.1 transposase-like protein Not tested Not named Protein 2e-18 52
CDC7B_2058 YP_005163499.1 transposase-like protein Not tested Not named Protein 2e-18 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFV_1073 YP_688589.1 IS629 ORF2 VFG1715 Protein 3e-50 93