Gene Information

Name : SFV_1068 (SFV_1068)
Accession : YP_688584.1
Strain : Shigella flexneri 8401
Genome accession: NC_008258
Putative virulence/resistance : Unknown
Product : IS911 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1114724 - 1115290 bp
Length : 567 bp
Strand : +
Note : -

DNA sequence : 
ATGAACATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGT
GACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGAGCTGTTCGCAAGAAAACCAGTGGGCTGGG
CCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGG
GTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACA
GAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAATGGATGC
CGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAACGGACTATATCGTTGGATATTACAGTGCACTAAGA
CCGCACGAATATAACGGTGGGTTACCCCCAAACGAATCGGAAAATCGATACTGGAAAAACTCTAACTCGGTGGCCAGTTT
TTGTTGA

Protein sequence : 
MNMLLSLTTLKGSSPVTEPNQVWCGDVTYIWTGKRWAYLAVVLELFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPGG
VMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALR
PHEYNGGLPPNESENRYWKNSNSVASFC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 2e-75 90
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 2e-75 90
unnamed CAI43898.1 putative transposase Not tested LEE Protein 7e-53 64
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 7e-53 64
unnamed AAC31485.1 L0006 Not tested LEE Protein 2e-53 62
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 2e-53 62
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 1e-53 62
Z5089 NP_290241.1 transposase Not tested LEE Protein 2e-53 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFV_1068 YP_688584.1 IS911 ORF2 VFG1484 Protein 8e-76 90
SFV_1068 YP_688584.1 IS911 ORF2 VFG0785 Protein 5e-54 62