Gene Information

Name : galE (CHU_0833)
Accession : YP_677459.1
Strain : Cytophaga hutchinsonii ATCC 33406
Genome accession: NC_008255
Putative virulence/resistance : Virulence
Product : UDP-galactose-4-epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : 5.1.3.2
Position : 939655 - 940614 bp
Length : 960 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAGAATATTGATTACAGGCGGAGCAGGGTTTATCGGTTCAAACCTGACAGAAGCGTTATTGAACAGAAGTGATGT
TGAGCTGGTGCGTGTACTGGATAATTTTTCAACAGGATACCAGCACAACATACATGAATTTTTGACCCACCCCAAATATG
AATTTGTTGAGGGCGATATCCGTAACTATGAAGATGTAGTTAAAGCAGTAGAGGGAATCGAAGTGATCAGCCATCAGGCT
GCACTTGGTTCTGTACCGCGTTCGCTAAAAGATCCTATGACCAGTAATAATGCAAACGTGCTGGGTTCCATGAATGTTTT
TCATGCTGCAAAAGAATCAGGTGCAGACCGTGTCGTGTACGCATCTTCCTCTTCGGTTTATGGAGATGATCCGGGTTCAC
CTAAGGAAGAAGACCGTTTGGGTAATGTGTTGTCTCCGTACGCTGCAAGTAAGCGCAGTATTGAACTGTATGCAAAGGCG
TTCAGCAACGTCTATCCATTTCGTTTTATTGCTATGCGTTACTTCAATGTGTTTGGTCCCAGGCAAAATGCGCAGGGAGC
ATATGCTGCCGTAATACCTCAATTCATAACTGCATTATTAAATGGGCAGCAGGCTACAATCTTCGGAGATGGCTCCCAGA
CACGCGATTTTACCTTTATTGATAATGTATTACAAATGAATATAAAAGCACTGTCTACAGATAATGCAGATGCGTTTAAC
AGATATTATAATGTAGCCTGCGGCTCAACAACTTCCTTGAACCGTGTATATGCTATACTTGCAGGCTGTGCCGGCTCAGA
CATTAAGCCCCATTATACGGATCCAAGACAAGGAGATATAAAAGACAGTCTGGCCAATATCAGTTTAGCGCAAAAGCACA
TTGGATATAAACCCGAAATACAGATTGAAGAAGGATTAATTAAAACCTTCGACTGGTTTAAAAAGAATCAAGGTGAATAA

Protein sequence : 
MKRILITGGAGFIGSNLTEALLNRSDVELVRVLDNFSTGYQHNIHEFLTHPKYEFVEGDIRNYEDVVKAVEGIEVISHQA
ALGSVPRSLKDPMTSNNANVLGSMNVFHAAKESGADRVVYASSSSVYGDDPGSPKEEDRLGNVLSPYAASKRSIELYAKA
FSNVYPFRFIAMRYFNVFGPRQNAQGAYAAVIPQFITALLNGQQATIFGDGSQTRDFTFIDNVLQMNIKALSTDNADAFN
RYYNVACGSTTSLNRVYAILAGCAGSDIKPHYTDPRQGDIKDSLANISLAQKHIGYKPEIQIEEGLIKTFDWFKKNQGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 5e-60 47
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 5e-60 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
galE YP_677459.1 UDP-galactose-4-epimerase VFG0430 Protein 2e-60 47