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Name : serS (CHU_3604) Accession : YP_680180.1 Strain : Cytophaga hutchinsonii ATCC 33406 Genome accession: NC_008255 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 4158765 - 4160036 bp Length : 1272 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTGCAAATCAATTATATCCGTGAGAATAAAGCCTTGGTAGTGGAAGGGCTTAAAAAGAAGTATTTTGCTGATGCGGA ACAAAAAGTAGAAGAAATCATCAAAATCGACCAAAGCAGACGCGAAACGCAACATTCGTTGGATTTTTTACAATCAGAAG CAAACCAAAAGGCTAAAGCAATTGGTGAACTGATGAAGCAGGGCAAAAAAGAAGAAGCTGAAAAAGAAAAGGCTGCTGCA ACAGACCTGAGAAATAAAACAAAAGAACTGCAGGATTTTCTGACTGAAAAGGAAGAAGAACTTCAGAATGTATTAGTAAA GCTGCCAAACCTTCCGCACGCAAGTGTACCGGTTGGGCGTACGCCGGAAGAAAATATTACCATTTATTCCAGTGGTGAAA TACCAGTACTGCATGCTGATGCACAGCCGCATTGGGAACTGATCAAAAAATACGACATCATAGATTTTGACCTGGGCAAT AAAATTACCGGTGCAGGATTTCCTGTTTATAAAAACAAAGGCGCACGGTTACAGCGCGCGTTGATTAACTTTTTCCTGGA TGAAGCAGGCAAAAGCGGCTATACAGAAGTACAACCGCCTATTATGGTGAACGAAGCTTCTGCGTATGCTACGGGCCAGT TACCGGATAAAGACGGACAGATGTATTATGCCAGCGAAGATAAATTTTATTTAATACCAACAGCCGAGGTGCCTATTACA AATATGTACCGCGACATGATTATTAAAGAAGAGGATCTTCCGATTAAAAATACCGGTTACACGCCTTGCTTCAGAAGAGA AGCGGGATCCTGGGGAGCAGATGTACGCGGCCTGAACCGCCTGCATCAGTTTGATAAAGTTGAATTGGTACAGATTGCAA CACCGGAAACATCGTATGCAATTTTAGAAGAAATGAAAAAACATGTACAAGGCTTACTGGAAAAACTGGAACTGCCTTAC CGAATCCTGCATTTATGCGGCGGAGATATGAGCTTTACATCTGCCTTAACGTTTGACTTTGAAGTATATTCAGCAGCGCA GAAGCGCTGGCTGGAAGTAAGTTCAGTAAGTAATTTTGAAAACTACCAGGCAAACCGTTTAAAGCTGCGCTATAAAACAG ACGGAAAAACACAGCTGCTGCATACCTTAAACGGCAGTGCGTTAGCGCTTCCGCGTATTGTTGCTTCTATACTGGAAAAC AATCAGACACCGGAAGGAATCCGTATTCCGAAAGTATTGCAGGCATATACCGGCTTTGATATGATCAAGTAA Protein sequence : MLQINYIRENKALVVEGLKKKYFADAEQKVEEIIKIDQSRRETQHSLDFLQSEANQKAKAIGELMKQGKKEEAEKEKAAA TDLRNKTKELQDFLTEKEEELQNVLVKLPNLPHASVPVGRTPEENITIYSSGEIPVLHADAQPHWELIKKYDIIDFDLGN KITGAGFPVYKNKGARLQRALINFFLDEAGKSGYTEVQPPIMVNEASAYATGQLPDKDGQMYYASEDKFYLIPTAEVPIT NMYRDMIIKEEDLPIKNTGYTPCFRREAGSWGADVRGLNRLHQFDKVELVQIATPETSYAILEEMKKHVQGLLEKLELPY RILHLCGGDMSFTSALTFDFEVYSAAQKRWLEVSSVSNFENYQANRLKLRYKTDGKTQLLHTLNGSALALPRIVASILEN NQTPEGIRIPKVLQAYTGFDMIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-70 | 44 |
