|
Name : wecC (CHU_3392) Accession : YP_679971.1 Strain : Cytophaga hutchinsonii ATCC 33406 Genome accession: NC_008255 Putative virulence/resistance : Virulence Product : UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : 1.1.1.- Position : 3873071 - 3874369 bp Length : 1299 bp Strand : - Note : - DNA sequence : ATGCCTACTTTCAGTAATCAACTGATTCAAAAAAATCAAACGTTAGCTGTTATAGGCTTGGGTTATGTAGGCTTACCAAT TGCTTTAGCTTTTGCAAAAAAAGTTAAAGTAATTGGTTTTGATATCAATTCGAAACGAATCGATATCATGAAAAAAAATA TAGATCCAAGCGGCGAGCTTAGAGAAAGTGATTTTTTAAACAGCGATATTTTTTTTACAGCTGAATTATCTGATTTAAAA AAGGCATCCTTTTATATTGTTACCGTACCAACACCTATTGACGAGTTTAATCATCCTGATCTTGCACCACTTGTTTCTGC AACCAGAACAATTGCTAAAGTATTAAAACAAGGTGATTATGTTGTGTATGAATCTACCGTATATCCTGGATGTACAGAAG AAGAATGTATTCCGTTGCTGGAGGAACTTTCCGGTTTGGTATGCGGCAAAGATTTTAAAGTCGGTTATTCGCCTGAAAGA ATTAATCCGGGAGACAAGGAACATACACTTGCTAAAATTACAAAAGTAGTTGCCGGCTGTGATGCAGAAAGTCTTGACAT CATTGCACAAACCTATGAGATTGTAGTTGATGCAGGTATCCATAAAGCATCATCCATTAAAGTAGCAGAAGCCGCAAAGA TTATTGAAAACACACAGCGTGATGTAAACATTGCACTCATGAATGAGTTATCTGTGATTTGTGATAAACTAAACATCAAT ACGCTTGAAGTATTAGAGGCCGCCAGTACAAAATGGAATTTCCTGCCTTTTACACCGGGCCTTGTAGGCGGACATTGTAT TGGTGTTGACCCCTATTACTTAACGTATAAAGCCAGAAAGCTTGGCTTAAACCCAAACGTTATTTTGAGCGGCAGATTGA TCAATGATCAAATGCCGATGAACATTGCAAAAAAAATCGTTAAGTCTTTAATCAAATCCGGTACAGATATTTCAAAAGGA CGGGTATTGGTGTTAGGCGTTACGTTTAAAGAGAATGTTGAAGACATAAGAAATTCTAAGGTTGCAGAATTAATAAAGGA ATTACAATCTTATAGCCTGCAGGTAGATGCTGTAGATCCATACGCATCTTTTCAGGAATTTAAACATGAATATAATTTAG ATTTTTCAACAGAAATAACGGGTACATATGACGTTGTTATATTAGCCGTATCTCATAAAGAATATCAAAAACTGAACATT GAGTACTTCGAAAACCTGTTAACAGAAAAAGGTATTTTTGTAGATATTAAAGGACTATACAGAAAACAAAATCATAGAAA TTCCTATTGGACATTATAA Protein sequence : MPTFSNQLIQKNQTLAVIGLGYVGLPIALAFAKKVKVIGFDINSKRIDIMKKNIDPSGELRESDFLNSDIFFTAELSDLK KASFYIVTVPTPIDEFNHPDLAPLVSATRTIAKVLKQGDYVVYESTVYPGCTEEECIPLLEELSGLVCGKDFKVGYSPER INPGDKEHTLAKITKVVAGCDAESLDIIAQTYEIVVDAGIHKASSIKVAEAAKIIENTQRDVNIALMNELSVICDKLNIN TLEVLEAASTKWNFLPFTPGLVGGHCIGVDPYYLTYKARKLGLNPNVILSGRLINDQMPMNIAKKIVKSLIKSGTDISKG RVLVLGVTFKENVEDIRNSKVAELIKELQSYSLQVDAVDPYASFQEFKHEYNLDFSTEITGTYDVVILAVSHKEYQKLNI EYFENLLTEKGIFVDIKGLYRKQNHRNSYWTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-105 | 57 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-98 | 50 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-98 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wecC | YP_679971.1 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase | VFG0431 | Protein | 3e-98 | 50 |
