Gene Information

Name : wecC (CHU_3392)
Accession : YP_679971.1
Strain : Cytophaga hutchinsonii ATCC 33406
Genome accession: NC_008255
Putative virulence/resistance : Virulence
Product : UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : 1.1.1.-
Position : 3873071 - 3874369 bp
Length : 1299 bp
Strand : -
Note : -

DNA sequence :
ATGCCTACTTTCAGTAATCAACTGATTCAAAAAAATCAAACGTTAGCTGTTATAGGCTTGGGTTATGTAGGCTTACCAAT
TGCTTTAGCTTTTGCAAAAAAAGTTAAAGTAATTGGTTTTGATATCAATTCGAAACGAATCGATATCATGAAAAAAAATA
TAGATCCAAGCGGCGAGCTTAGAGAAAGTGATTTTTTAAACAGCGATATTTTTTTTACAGCTGAATTATCTGATTTAAAA
AAGGCATCCTTTTATATTGTTACCGTACCAACACCTATTGACGAGTTTAATCATCCTGATCTTGCACCACTTGTTTCTGC
AACCAGAACAATTGCTAAAGTATTAAAACAAGGTGATTATGTTGTGTATGAATCTACCGTATATCCTGGATGTACAGAAG
AAGAATGTATTCCGTTGCTGGAGGAACTTTCCGGTTTGGTATGCGGCAAAGATTTTAAAGTCGGTTATTCGCCTGAAAGA
ATTAATCCGGGAGACAAGGAACATACACTTGCTAAAATTACAAAAGTAGTTGCCGGCTGTGATGCAGAAAGTCTTGACAT
CATTGCACAAACCTATGAGATTGTAGTTGATGCAGGTATCCATAAAGCATCATCCATTAAAGTAGCAGAAGCCGCAAAGA
TTATTGAAAACACACAGCGTGATGTAAACATTGCACTCATGAATGAGTTATCTGTGATTTGTGATAAACTAAACATCAAT
ACGCTTGAAGTATTAGAGGCCGCCAGTACAAAATGGAATTTCCTGCCTTTTACACCGGGCCTTGTAGGCGGACATTGTAT
TGGTGTTGACCCCTATTACTTAACGTATAAAGCCAGAAAGCTTGGCTTAAACCCAAACGTTATTTTGAGCGGCAGATTGA
TCAATGATCAAATGCCGATGAACATTGCAAAAAAAATCGTTAAGTCTTTAATCAAATCCGGTACAGATATTTCAAAAGGA
CGGGTATTGGTGTTAGGCGTTACGTTTAAAGAGAATGTTGAAGACATAAGAAATTCTAAGGTTGCAGAATTAATAAAGGA
ATTACAATCTTATAGCCTGCAGGTAGATGCTGTAGATCCATACGCATCTTTTCAGGAATTTAAACATGAATATAATTTAG
ATTTTTCAACAGAAATAACGGGTACATATGACGTTGTTATATTAGCCGTATCTCATAAAGAATATCAAAAACTGAACATT
GAGTACTTCGAAAACCTGTTAACAGAAAAAGGTATTTTTGTAGATATTAAAGGACTATACAGAAAACAAAATCATAGAAA
TTCCTATTGGACATTATAA

Protein sequence :
MPTFSNQLIQKNQTLAVIGLGYVGLPIALAFAKKVKVIGFDINSKRIDIMKKNIDPSGELRESDFLNSDIFFTAELSDLK
KASFYIVTVPTPIDEFNHPDLAPLVSATRTIAKVLKQGDYVVYESTVYPGCTEEECIPLLEELSGLVCGKDFKVGYSPER
INPGDKEHTLAKITKVVAGCDAESLDIIAQTYEIVVDAGIHKASSIKVAEAAKIIENTQRDVNIALMNELSVICDKLNIN
TLEVLEAASTKWNFLPFTPGLVGGHCIGVDPYYLTYKARKLGLNPNVILSGRLINDQMPMNIAKKIVKSLIKSGTDISKG
RVLVLGVTFKENVEDIRNSKVAELIKELQSYSLQVDAVDPYASFQEFKHEYNLDFSTEITGTYDVVILAVSHKEYQKLNI
EYFENLLTEKGIFVDIKGLYRKQNHRNSYWTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-105 57
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 7e-98 50
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 7e-98 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wecC YP_679971.1 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase VFG0431 Protein 3e-98 50