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Name : gspE (CHU_3196) Accession : YP_679779.1 Strain : Cytophaga hutchinsonii ATCC 33406 Genome accession: NC_008255 Putative virulence/resistance : Virulence Product : type II general secretion pathway (GSP) E protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3635085 - 3636521 bp Length : 1437 bp Strand : - Note : - DNA sequence : ATGGATATATTTGAAAGCATACAATTATCTGCTAAAGAAATTCAACGCCTCACACCCGATCAGGCCTGGCATTACCATAT CCTTCCGGTTCCATCCGGATATACCGATCAAGGAGATTTTTTTATTTCGGATCAGAAAAACGGCTTGCAGGCACAGGAAG ATTTAGAAATTATATTCGGTTCAACGCAGCAATTGCTGGAGCTTGAGCACGAAGCGATCCTGAAACTGCTTTCTAAATAT TACCGTAAAGAACATCAGACAGGTTCAACGAATACCTTAAGTTATGATTCTTCTTCAGATGATTTTTTGAAGAAGCTGAT CGTAGAAGCCAAACAAATTCAAAGCAGTGATATTCATTTAGAAATCTACGAAGCGAAATGCCGCGTACGATTACGGATTG ATGGGCAGATGGTAGAACGCTTTATCATTGAGCAGACGCATTACCCGTCTTTGGTGAACCGTATTAAGATTATGTCGCAT CTAGACATTTCTGAAAAAAGATTGCCGCAGGATGGACGGATTTTTTTTCAGTTTGGGGAAGGCAAATTTGATATCCGTGT TTCTGTATTGCCTACCTTGCATGGAGAAAAAATTGTGATGCGTTTATTAAATCAGGACGCAACCAACATCAATATTGAAA CGTTAGGATTTGCACAAACAGATTTAGAAAATTACTTAGACAGTACAAAACGCAAGCAGGGCCTGATTTTAATAAGCGGC CCCACAGGTTCGGGTAAAACAACTACCTTATACGCCACATTAAAATTGCTGAATAAAACAACGCGGAATATTTTAACGAT TGAAGATCCCGTTGAATATACACTCGAAGGCGTGAATCAGGCACAATTAAAAGAAAACATTGGATTTAACTTTGGCAGTG CATTAAAAACATTCTTACGGCAGGATCCGGATATTATTATGGTGGGCGAGATCCGCGATCAGGATACCGCTAACATGGCT ATACGTCTGTCCTTAACCGGTCACCTCGTACTTTCAACCATACACACCAACTCTGCCTGGGGCACGGTAGCCCGATTGAT AGATATGGGTGTGCCGCCTTTTTTATTAGCAGGTACACTAAGTGTTTCTGTTGCGCAGCGTTTAGTGCGGTTATTATGTC CACATTGCAAACAGCAAACGCCATTTAGTGCAACAGATTATCCTAAAGGATTTAAAGCCCCGATGCATGTAGATGTGCAC TATATATCCACAGGTTGTGAACAGTGTTTCTACACAGGGTATAAAGGCAGAAAGGCTGTATACGAGGTTATTCCTATTGA TCAGGAGATGGCAGAGTGTATAAAAAATACTATCTTTGAAGTGTCGGATAAATTGAAGGAAAGGAACATCAAAACATTAT CCGATAATGCTTTTCAATTGTTTGCAGAAGGCAACACATCGTTAGATGAAATATATTCATTATTAGTTAATTTTTAA Protein sequence : MDIFESIQLSAKEIQRLTPDQAWHYHILPVPSGYTDQGDFFISDQKNGLQAQEDLEIIFGSTQQLLELEHEAILKLLSKY YRKEHQTGSTNTLSYDSSSDDFLKKLIVEAKQIQSSDIHLEIYEAKCRVRLRIDGQMVERFIIEQTHYPSLVNRIKIMSH LDISEKRLPQDGRIFFQFGEGKFDIRVSVLPTLHGEKIVMRLLNQDATNINIETLGFAQTDLENYLDSTKRKQGLILISG PTGSGKTTTLYATLKLLNKTTRNILTIEDPVEYTLEGVNQAQLKENIGFNFGSALKTFLRQDPDIIMVGEIRDQDTANMA IRLSLTGHLVLSTIHTNSAWGTVARLIDMGVPPFLLAGTLSVSVAQRLVRLLCPHCKQQTPFSATDYPKGFKAPMHVDVH YISTGCEQCFYTGYKGRKAVYEVIPIDQEMAECIKNTIFEVSDKLKERNIKTLSDNAFQLFAEGNTSLDEIYSLLVNF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-67 | 42 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-67 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_679779.1 | type II general secretion pathway (GSP) E protein | VFG1876 | Protein | 6e-73 | 44 |
| gspE | YP_679779.1 | type II general secretion pathway (GSP) E protein | VFG2426 | Protein | 2e-65 | 42 |
| gspE | YP_679779.1 | type II general secretion pathway (GSP) E protein | VFG2048 | Protein | 1e-68 | 42 |
