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Name : clpB (CHU_3123) Accession : YP_679705.1 Strain : Cytophaga hutchinsonii ATCC 33406 Genome accession: NC_008255 Putative virulence/resistance : Virulence Product : heat shock protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3568996 - 3571611 bp Length : 2616 bp Strand : - Note : - DNA sequence : ATGAATATTAATAATTACACGATTAAAGGGCAGGAGGCATTTCAGAAAGCGATGGAAATTGTTGCTGCCAACGAACAGCA ATCCATTGAATCTGTTCACTTATTGAAAGGAATAATCGTTGCGGATGAAAACGTGGTTCCTTTTTTATTCAAAAAAAATA ATATCAATCCGGTTACGTTTAATCAGACATTGGATGCCGTAATTAAAACCTACGGTAAAGTTTCCGGAGGCAGTCCGTAT TTGTCAAACGATGCCACGCAGGTATTAAATAAAGCTACGGCTTTATCAAAAGAGTTTGGCGACGAATATATTTCGATCGA GCACATGTTGCTTGCATTGGTTTCAGGGAAAGATAAGGCTGCAACGTTATTAAAAGATGCCGGCCTTTCGGAAAAGGGCT TGCGCGCTGCGATCCAGGAGTTACGTGGTACAAGTAAAGTAACCGATCAGCATGCGGAAGGTAAATACCGGTCGCTTGAA AAATATTCTAAAAATTTAAATGACCTGGCTCGTTCCGGAAAAATTGATCCGGTGATTGGCCGGGATGAAGAGATCCGCAG AGTACTGCAGATCTTATCCAGACGTACCAAAAATAATCCGATTTTATTGGGCGAGCCGGGCGTTGGTAAAACAGCTATCG CTGAAGGCCTTGCACAGCGTATTGTTTCGGGTGATGTTCCTGAAAATTTAAAAAGCAAACAATTAATCTCTCTGGATATG GGTTTGCTGGTTGCAGGTGCAAAGTATAAAGGTGAATTTGAAGAGCGGTTGAAATCGGTGATCAAAGAAGTGATCGATTC AGATGGCGAGATTGTGTTATTCATTGATGAGATCCATACGTTAATTGGTGCCGGCGGCGGGGAAGGTGCGATGGATGCGG CAAACTTGCTGAAACCTGCACTTGCACGTGGTGAGCTGCATGCAATCGGTGCAACAACCTTAAAAGAATATCAGAAATAC ATTGAAAAAGATAAAGCGCTGGAACGTCGTTTCCAAGCGGTAATTGTTGACGAGCCGAATACACAGGATGCAATTTCTAT CCTTCGCGGGATCAAAGAAAAATACGAAGTGCATCACGGAATCCGGATTCAGGATGATGCCATCATTGCTGCAGTAGAAC TTTCTCAACGCTATATCAGTGATCGTTATTTGCCCGATAAAGCGATTGATTTGATGGATGAAGCATCTGCTAAATTGCGT ATCGAGCTTGATTCTATGCCGCAGGAGCTGGATGAAATTCTTCGCCGTATCATGCAGCTGGAAATTGAACGTGAAGCGAT CCGTAGAGAAAATAATAAAGAGAAGGAAACGATTCTTTCCCGTGAACTTGCAGAACTGAATGAGCAGAAGAGCCAGATCA TGGCTAAGTGGCAGGAGGAAAAACGTGTGATCGATGGCTTGAAGCAAGCCAAGGAAGATATCGACCGGTACAAAATGGAA GCCGAGCAAGCCGAACGTAATGGTGATTACGGTAAGGTTGCAGAGATCCGTTATGGTAAAATTCAGGAGTCTGAAAAGCA ATTGGTCGAATTCAACAAGCAGCTGCAGGAGTTGAAACAAACACTTGGTTCTTCGATGCTGAAAGAAGAAGTGACGCCGG AAGATATTGCAGAAGTTGTTGCGAAATGGACAGGCATACCGGTTTCAAAAATGCTTCAGAGTGAGAGAGAAAAGTTGCTT CACTTAGAAGAAGAGTTAGGTAAACGTGTCGCCGGACAAGCGGAAGCGATAGAGGCCATATCCGATGCGGTCCGTAGGAG CAGAGCAGGCTTACAGGATCCGAAGCGTCCGATAGGTTCTTTTATTTTCTTAGGAACAACAGGTGTTGGTAAAACCGAAC TGGCAAAAGCACTGGCTGATTATTTATTCAACGACGACAATGCTATGGTACGTATTGATATGTCTGAATATCAGGAAAGC CATGCTGTAAGTCGCTTGGTTGGTGCACCTCCGGGATACATCGGATATGAAGAAGGGGGACAATTAACGGAAGCTGTTCG ACGGAAGCCGTATTCAGTAATTTTATTGGATGAGATTGAAAAGGCCCATCCGGATGTATTTAATATATTGCTTCAGGTAT TGGATGAAGGGCGCTTGACAGATAATAAAGGCCGTGTAGCGAACTTTAAAAATGCAATCATTATCATGACATCCAATATG GGTGCGCATGTGATTCAGGAGAATTTTGATAAGCTAACTGCTGCAAATGAAGATCAGGTAGTTGAGGAAACAAAAAATGA AGTAATTGATTTATTACGTAAAACGATTCGGCCGGAGTTCTTGAATCGTGTCGATGAAATTATAATGTTCAGACCGCTGA CCCGAAAAGAGATTCGTAAGATTGTTGGTATACAGTTTAGCTTGATCCAAAAACGTCTCGAAGAGAACGGAATCAAAGTT GAGGCAAGTACCGAAGTATTGGATAAATTGGGAGAGTTAGGTTTCGATCCGCAATTCGGTGCACGTCCGTTGAAACGTGT CATGCAGCGTTTGATCCTGAATGAATTGTCCAAAGAAATTCTTTCCGGAAACATTCAGAAAGAAAGTGTTGTAGGCATTA CGCTTGGTGAAGATGGGAATCTGCAGTTTTTGAACTTGGATAGTGTACCGTTGTAA Protein sequence : MNINNYTIKGQEAFQKAMEIVAANEQQSIESVHLLKGIIVADENVVPFLFKKNNINPVTFNQTLDAVIKTYGKVSGGSPY LSNDATQVLNKATALSKEFGDEYISIEHMLLALVSGKDKAATLLKDAGLSEKGLRAAIQELRGTSKVTDQHAEGKYRSLE KYSKNLNDLARSGKIDPVIGRDEEIRRVLQILSRRTKNNPILLGEPGVGKTAIAEGLAQRIVSGDVPENLKSKQLISLDM GLLVAGAKYKGEFEERLKSVIKEVIDSDGEIVLFIDEIHTLIGAGGGEGAMDAANLLKPALARGELHAIGATTLKEYQKY IEKDKALERRFQAVIVDEPNTQDAISILRGIKEKYEVHHGIRIQDDAIIAAVELSQRYISDRYLPDKAIDLMDEASAKLR IELDSMPQELDEILRRIMQLEIEREAIRRENNKEKETILSRELAELNEQKSQIMAKWQEEKRVIDGLKQAKEDIDRYKME AEQAERNGDYGKVAEIRYGKIQESEKQLVEFNKQLQELKQTLGSSMLKEEVTPEDIAEVVAKWTGIPVSKMLQSEREKLL HLEEELGKRVAGQAEAIEAISDAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALADYLFNDDNAMVRIDMSEYQES HAVSRLVGAPPGYIGYEEGGQLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDEGRLTDNKGRVANFKNAIIIMTSNM GAHVIQENFDKLTAANEDQVVEETKNEVIDLLRKTIRPEFLNRVDEIIMFRPLTRKEIRKIVGIQFSLIQKRLEENGIKV EASTEVLDKLGELGFDPQFGARPLKRVMQRLILNELSKEILSGNIQKESVVGITLGEDGNLQFLNLDSVPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-99 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-99 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_679705.1 | heat shock protein | VFG2076 | Protein | 4e-122 | 44 |
| clpB | YP_679705.1 | heat shock protein | VFG2084 | Protein | 1e-101 | 41 |
