|
Name : CHU_0298 (CHU_0298) Accession : YP_676929.1 Strain : Cytophaga hutchinsonii ATCC 33406 Genome accession: NC_008255 Putative virulence/resistance : Virulence Product : KpsF/GutQ family sugar isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 357540 - 358508 bp Length : 969 bp Strand : + Note : - DNA sequence : TTGAAGTTAACAAAAAATATCGTATCCATTGTAACAGATGTAATATTAAATGAATCTGAAGCAATAAAAAATCTGGTCAA TCATATTAATGATGATTTTCAGCATATTATTGACGCAATCCTGTCATGTAAGGGAAGAGTTGTAATTACTGGCATCGGTA AAAGTGCCATCATCGGCAATAAGATAGTAGCAACCCTGAATTCAACCGGTACACCTGCTTTATTCATGCATGCTGCAGAT GCCATACACGGTGATTTAGGAATGATCCAGGGTGGTGATGTGGTAATTTGTATTTCCAAAAGCGGAAATACACCAGAAAT CAAAGTTTTAGTACCATTGATAAAAAACAGAGGCACCATTTTGATTGGAATGGTAGGGAATGTAGATTCATACCTGGCAG TACAATCTGATTATGTGTTAAACGTTACTGTAGAGCGTGAGGCTTGCCCCAATAACCTTGCTCCTACAACCAGTACTACG GCTACGCTTGTAATGGGTGATGCGTTGGCGGTTGCTTTATTGGAATGCAGAAATTTCAGCAGTGAAGATTTTGCTCAGCT GCACCCGGGCGGCGCATTAGGAAAACAATTGTATTTACGCGTAAATGACGTCTACACTGCAAATGAAAAACCAATGGTAG CACCGGATGCAACGGTTAAGGATGTTATTCTTGAAATTTCATCCAAACGTTTAGGTGCTGCAGCTGTTGTAGATTCGGCA GGAATTTTGCAAGGTATTATTACAGATGGAGATTTGAGAAGAATGTTAAATGCACATGATTCATTCAAACAGTTATGTGC AGCTGATATTATGACCAAAGCACCCAAGACAATTGACGCAGATGAATTTGCAGCTTCTGCCATGCTGCTTATGCAGTCTA AAAATATTACACAGTTGATTGTTATGAAAAATGAAAATTTTGCTGGATTTATTCATATACATGATTTATTAAAAGAAGGA ATTGTTTAA Protein sequence : MKLTKNIVSIVTDVILNESEAIKNLVNHINDDFQHIIDAILSCKGRVVITGIGKSAIIGNKIVATLNSTGTPALFMHAAD AIHGDLGMIQGGDVVICISKSGNTPEIKVLVPLIKNRGTILIGMVGNVDSYLAVQSDYVLNVTVEREACPNNLAPTTSTT ATLVMGDALAVALLECRNFSSEDFAQLHPGGALGKQLYLRVNDVYTANEKPMVAPDATVKDVILEISSKRLGAAAVVDSA GILQGIITDGDLRRMLNAHDSFKQLCAADIMTKAPKTIDADEFAASAMLLMQSKNITQLIVMKNENFAGFIHIHDLLKEG IV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 5e-52 | 44 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 4e-52 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-51 | 44 |
